| UniProt: | P0A7N9 | Sequence |
Download Alignment We filter this alignment to remove sites that have > 75% gaps before running GREMLIN. |
| EcoGene: | EG10891 | ||
| Length: | 55 (54) | ||
| Sequences: | 1105 | ||
| Seq/Len: | 20.46 |
| RL33
Paralog alert: 0.20 [within 20: 0.00] - ratio of genomes with paralogs |
Legend: The darker and larger the blue dots, the higher coevolution strength.
Residue pairs sorted by coevolution strength:
| i | j | Scaled Score | Prob | |
| 18_G | 42_V | 3.205 | 1.00 | |
| 19_H | 49_Y | 2.946 | 1.00 | |
| 35_E | 48_I | 2.752 | 1.00 | |
| 16_G | 40_D | 2.37 | 1.00 | |
| 12_V | 52_A | 2.263 | 1.00 | |
| 15_A | 45_Q | 1.877 | 1.00 | |
| 30_K | 34_L | 1.844 | 1.00 | |
| 6_R | 27_K | 1.838 | 1.00 | |
| 37_K | 48_I | 1.77 | 1.00 | |
| 8_K | 22_T | 1.671 | 1.00 | |
| 40_D | 43_V | 1.65 | 1.00 | |
| 16_G | 43_V | 1.583 | 1.00 | |
| 39_F | 44_R | 1.57 | 1.00 | |
| 30_K | 36_L | 1.556 | 1.00 | |
| 13_S | 40_D | 1.482 | 1.00 | |
| 19_H | 52_A | 1.481 | 1.00 | |
| 26_N | 29_T | 1.427 | 1.00 | |
| 37_K | 46_H | 1.349 | 0.99 | |
| 35_E | 50_K | 1.299 | 0.99 | |
| 23_T | 26_N | 1.251 | 0.99 | |
| 37_K | 45_Q | 1.225 | 0.98 | |
| 13_S | 49_Y | 1.206 | 0.98 | |
| 12_V | 19_H | 1.192 | 0.98 | |
| 7_E | 27_K | 1.128 | 0.97 | |
| 12_V | 20_F | 1.093 | 0.96 | |
| 1_M | 5_I | 1.074 | 0.95 |
- Text file of predictions (all 3L/2 predictions)
- Generate restraints for ROSETTA Structure Modeling
Legend: Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on 10 HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.
| PDB | Chains | Cov | P(%) | HHΔ | Acc | |
| 3v2d6 | 1 | 0.9818 | 99.8 | 0.02 | Contact Map | 0.731 |
| 4kix1 | 1 | 1 | 99.8 | 0.023 | Contact Map | 0.427 |
| 1nkw1 | 1 | 0.9818 | 99.8 | 0.028 | Contact Map | 0.017 |
| 2zjr1 | 1 | 0.9818 | 99.8 | 0.042 | Contact Map | 0.008 |
| 3bbo3 | 1 | 0.9818 | 99.8 | 0.068 | Contact Map | 0.076 |
| 2ftcP | 1 | 0.9091 | 99.7 | 0.138 | Contact Map | 0.032 |
| 3j39o | 1 | 0.4909 | 78.4 | 0.79 | Contact Map | 0.746 |
| 4a18C | 1 | 0.4909 | 78.2 | 0.791 | Contact Map | 0.797 |
| 3j21j | 1 | 0.4727 | 77.6 | 0.792 | Contact Map | 0.887 |
| 1vq83 | 1 | 0.4727 | 77.5 | 0.792 | Contact Map | 0.765 |
Sequence Conservation (Image Generated using WebLogo v3)