| UniProt: | P0A7M2 | Sequence |
Download Alignment We filter this alignment to remove sites that have > 75% gaps before running GREMLIN. |
| EcoGene: | EG10886 | ||
| Length: | 78 (78) | ||
| Sequences: | 678 | ||
| Seq/Len: | 8.69 |
| RL28
Paralog alert: 0.02 [within 20: 0.00] - ratio of genomes with paralogs |
Legend: The darker and larger the blue dots, the higher coevolution strength.
Residue pairs sorted by coevolution strength:
| i | j | Scaled Score | Prob | |
| 35_S | 48_T | 3.896 | 1.00 | |
| 18_R | 24_A | 3.538 | 1.00 | |
| 16_N | 26_K | 3.485 | 1.00 | |
| 62_K | 70_E | 2.987 | 1.00 | |
| 17_N | 25_T | 2.665 | 1.00 | |
| 42_S | 65_D | 2.042 | 1.00 | |
| 37_R | 46_F | 1.992 | 1.00 | |
| 34_H | 53_A | 1.954 | 1.00 | |
| 39_W | 44_K | 1.897 | 1.00 | |
| 40_V | 68_L | 1.816 | 1.00 | |
| 18_R | 22_L | 1.697 | 1.00 | |
| 52_S | 55_G | 1.67 | 1.00 | |
| 12_P | 28_R | 1.67 | 1.00 | |
| 40_V | 43_E | 1.633 | 1.00 | |
| 4_V | 11_R | 1.62 | 1.00 | |
| 7_V | 55_G | 1.546 | 1.00 | |
| 66_T | 70_E | 1.375 | 0.99 | |
| 12_P | 31_P | 1.367 | 0.99 | |
| 62_K | 66_T | 1.329 | 0.99 | |
| 55_G | 58_V | 1.221 | 0.98 | |
| 12_P | 60_D | 1.165 | 0.97 | |
| 73_A | 76_E | 1.154 | 0.96 | |
| 36_H | 56_M | 1.147 | 0.96 | |
| 43_E | 72_R | 1.14 | 0.96 | |
| 8_T | 55_G | 1.128 | 0.96 | |
| 7_V | 67_V | 1.099 | 0.95 | |
| 40_V | 65_D | 1.092 | 0.95 | |
| 38_F | 56_M | 1.09 | 0.94 | |
| 71_L | 74_R | 1.073 | 0.94 | |
| 39_W | 46_F | 1.072 | 0.94 | |
| 33_L | 50_R | 1.067 | 0.94 | |
| 19_S | 23_N | 1.065 | 0.94 | |
| 6_Q | 49_L | 1.049 | 0.93 | |
| 43_E | 65_D | 1.047 | 0.93 | |
| 35_S | 50_R | 1.019 | 0.91 | |
| 74_R | 78_Y | 1.017 | 0.91 |
- Text file of predictions (all 3L/2 predictions)
- Generate restraints for ROSETTA Structure Modeling
Legend: Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on 10 HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.
| PDB | Chains | Cov | P(%) | HHΔ | Acc | |
| 4kixX | 1 | 0.9872 | 100 | 0.045 | Contact Map | 0.8 |
| 3bboY | 1 | 0.9744 | 100 | 0.079 | Contact Map | 0.158 |
| 2jz6A | 1 | 0.9231 | 99.9 | 0.185 | Contact Map | 0.352 |
| 2zjrU | 1 | 0.7179 | 99.9 | 0.209 | Contact Map | 0.124 |
| 2jl61 | 1 | 0.7949 | 99.9 | 0.221 | Contact Map | 0.679 |
| 3v2d1 | 1 | 0.9615 | 99.9 | 0.242 | Contact Map | 0.658 |
| 2zouA | 2 | 0.5641 | 8 | 0.915 | Contact Map | 0 |
| 1kptA | 2 | 0.3974 | 6.4 | 0.919 | Contact Map | 0.206 |
| 2qneA | 2 | 0.5641 | 3.4 | 0.929 | Contact Map | 0.251 |
| 2k5cA | 1 | 0.9359 | 2.9 | 0.931 | Contact Map | 0.043 |
Sequence Conservation (Image Generated using WebLogo v3)