| UniProt: | P0A7L8 | Sequence |
Download Alignment We filter this alignment to remove sites that have > 75% gaps before running GREMLIN. |
| EcoGene: | EG50002 | ||
| Length: | 85 (84) | ||
| Sequences: | 1185 | ||
| Seq/Len: | 14.11 |
| RL27
Paralog alert: 0.01 [within 20: 0.00] - ratio of genomes with paralogs |
Legend: The darker and larger the blue dots, the higher coevolution strength.
Residue pairs sorted by coevolution strength:
| i | j | Scaled Score | Prob | |
| 32_L | 35_S | 3.327 | 1.00 | |
| 25_R | 31_V | 3.234 | 1.00 | |
| 53_C | 57_H | 3.221 | 1.00 | |
| 21_L | 41_R | 2.869 | 1.00 | |
| 52_G | 62_K | 2.702 | 1.00 | |
| 23_V | 38_V | 2.653 | 1.00 | |
| 25_R | 35_S | 2.363 | 1.00 | |
| 68_K | 83_E | 2.164 | 1.00 | |
| 70_E | 81_S | 1.845 | 1.00 | |
| 30_S | 66_K | 1.828 | 1.00 | |
| 25_R | 29_E | 1.816 | 1.00 | |
| 52_G | 60_F | 1.784 | 1.00 | |
| 51_V | 59_L | 1.764 | 1.00 | |
| 63_A | 84_A | 1.761 | 1.00 | |
| 46_H | 77_R | 1.637 | 1.00 | |
| 70_E | 83_E | 1.637 | 1.00 | |
| 43_T | 53_C | 1.633 | 1.00 | |
| 38_V | 45_F | 1.613 | 1.00 | |
| 17_E | 20_R | 1.59 | 1.00 | |
| 45_F | 80_I | 1.554 | 1.00 | |
| 45_F | 78_K | 1.492 | 1.00 | |
| 72_K | 79_F | 1.467 | 1.00 | |
| 54_G | 58_T | 1.461 | 1.00 | |
| 33_A | 64_D | 1.448 | 1.00 | |
| 25_R | 67_V | 1.338 | 0.99 | |
| 44_K | 78_K | 1.299 | 0.99 | |
| 32_L | 64_D | 1.253 | 0.99 | |
| 50_N | 63_A | 1.245 | 0.98 | |
| 1_M | 27_G | 1.232 | 0.98 | |
| 23_V | 26_F | 1.216 | 0.98 | |
| 71_V | 78_K | 1.205 | 0.98 | |
| 37_I | 59_L | 1.183 | 0.98 | |
| 53_C | 59_L | 1.161 | 0.97 | |
| 7_G | 10_T | 1.137 | 0.97 | |
| 71_V | 79_F | 1.124 | 0.97 | |
| 39_R | 56_D | 1.123 | 0.97 | |
| 73_G | 76_N | 1.1 | 0.96 | |
| 41_R | 57_H | 1.09 | 0.96 | |
| 31_V | 37_I | 1.085 | 0.96 | |
| 70_E | 79_F | 1.042 | 0.94 | |
| 43_T | 57_H | 1.038 | 0.94 | |
| 30_S | 64_D | 1.034 | 0.94 | |
| 68_K | 81_S | 1.019 | 0.93 | |
| 49_A | 83_E | 1 | 0.92 | |
| 23_V | 69_F | 1 | 0.92 |
- Text file of predictions (all 3L/2 predictions)
- Generate restraints for ROSETTA Structure Modeling
Legend: Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on 10 HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.
| PDB | Chains | Cov | P(%) | HHΔ | Acc | |
| 3bboX | 1 | 0.9882 | 100 | -0.028 | Contact Map | 0.082 |
| 4kixW | 1 | 1 | 100 | -0.02 | Contact Map | 0.326 |
| 3v2d0 | 1 | 0.9882 | 100 | -0.013 | Contact Map | 0.837 |
| 1pnuU | 1 | 0.9765 | 100 | 0.012 | Contact Map | 0 |
| 2ftcO | 1 | 0.8 | 100 | 0.122 | Contact Map | 0 |
| 4ifdG | 1 | 0.7059 | 79.2 | 0.875 | Contact Map | 0.766 |
| 2ba0A | 3 | 0.5765 | 74 | 0.881 | Contact Map | 0.839 |
| 2nn6G | 1 | 0.9529 | 72.2 | 0.882 | Contact Map | 0.535 |
| 2nn6I | 1 | 0.8471 | 70 | 0.884 | Contact Map | 0.604 |
| 4ifdI | 1 | 0.8706 | 57.1 | 0.893 | Contact Map | 0.588 |
Sequence Conservation (Image Generated using WebLogo v3)