| UniProt: | P0A790 | Sequence |
Download Alignment We filter this alignment to remove sites that have > 75% gaps before running GREMLIN. |
| EcoGene: | EG11747 | ||
| Length: | 126 (123) | ||
| Sequences: | 823 | ||
| Seq/Len: | 6.69 |
| PAND
Paralog alert: 0.02 [within 20: 0.00] - ratio of genomes with paralogs |
Legend: The darker and larger the blue dots, the higher coevolution strength.
Residue pairs sorted by coevolution strength:
| i | j | Scaled Score | Prob | |
| 38_I | 59_A | 4.169 | 1.00 | |
| 45_D | 56_S | 3.149 | 1.00 | |
| 53_K | 78_C | 2.962 | 1.00 | |
| 31_D | 65_G | 2.923 | 1.00 | |
| 47_W | 88_A | 2.669 | 1.00 | |
| 30_Q | 61_A | 2.606 | 1.00 | |
| 34_D | 64_R | 2.568 | 1.00 | |
| 30_Q | 64_R | 2.287 | 1.00 | |
| 109_E | 113_E | 2.155 | 1.00 | |
| 31_D | 64_R | 2.133 | 1.00 | |
| 93_M | 98_A | 2.11 | 1.00 | |
| 35_A | 114_M | 2.107 | 1.00 | |
| 28_I | 69_I | 2.043 | 1.00 | |
| 27_A | 62_A | 2.014 | 1.00 | |
| 10_L | 108_F | 2.004 | 1.00 | |
| 33_L | 59_A | 1.984 | 1.00 | |
| 26_C | 46_I | 1.961 | 1.00 | |
| 69_I | 87_I | 1.859 | 1.00 | |
| 48_N | 79_A | 1.846 | 1.00 | |
| 26_C | 44_I | 1.845 | 1.00 | |
| 2_I | 92_T | 1.837 | 1.00 | |
| 77_H | 80_S | 1.796 | 1.00 | |
| 7_Q | 42_E | 1.778 | 1.00 | |
| 49_V | 84_I | 1.773 | 1.00 | |
| 36_A | 106_A | 1.693 | 1.00 | |
| 50_T | 77_H | 1.681 | 1.00 | |
| 47_W | 90_F | 1.663 | 1.00 | |
| 43_A | 56_S | 1.65 | 1.00 | |
| 31_D | 34_D | 1.586 | 1.00 | |
| 3_R | 95_D | 1.479 | 0.99 | |
| 4_T | 43_A | 1.458 | 0.99 | |
| 17_H | 70_S | 1.456 | 0.99 | |
| 10_L | 13_V | 1.398 | 0.99 | |
| 4_T | 92_T | 1.382 | 0.98 | |
| 6_L | 88_A | 1.375 | 0.98 | |
| 67_R | 113_E | 1.375 | 0.98 | |
| 40_E | 61_A | 1.363 | 0.98 | |
| 55_F | 79_A | 1.362 | 0.98 | |
| 13_V | 85_V | 1.334 | 0.98 | |
| 50_T | 84_I | 1.327 | 0.98 | |
| 32_F | 108_F | 1.317 | 0.98 | |
| 37_G | 104_N | 1.289 | 0.97 | |
| 28_I | 87_I | 1.285 | 0.97 | |
| 28_I | 59_A | 1.237 | 0.96 | |
| 13_V | 108_F | 1.227 | 0.96 | |
| 3_R | 37_G | 1.221 | 0.96 | |
| 38_I | 89_S | 1.205 | 0.96 | |
| 23_E | 47_W | 1.201 | 0.95 | |
| 30_Q | 34_D | 1.167 | 0.94 | |
| 33_L | 38_I | 1.166 | 0.94 | |
| 93_M | 97_E | 1.109 | 0.92 | |
| 95_D | 99_R | 1.108 | 0.92 | |
| 26_C | 79_A | 1.107 | 0.92 | |
| 37_G | 95_D | 1.098 | 0.92 | |
| 98_A | 101_W | 1.085 | 0.91 | |
| 49_V | 74_A | 1.082 | 0.91 | |
| 93_M | 101_W | 1.031 | 0.88 | |
| 8_G | 37_G | 1.029 | 0.88 | |
| 29_D | 66_S | 1.028 | 0.88 | |
| 69_I | 85_V | 1.016 | 0.87 | |
| 48_N | 53_K | 1.004 | 0.86 |
- Text file of predictions (all 3L/2 predictions)
- Generate restraints for ROSETTA Structure Modeling
Legend: Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on 10 HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.
| PDB | Chains | Cov | P(%) | HHΔ | Acc | |
| 1pqhA | 2 | 1 | 100 | -0.027 | Contact Map | 0.799 |
| 2c45A | 8 | 0.9921 | 100 | -0.008 | Contact Map | 0.785 |
| 3ougA | 8 | 0.881 | 100 | 0.034 | Contact Map | 0.834 |
| 1vc3B | 1 | 0.7619 | 100 | 0.244 | Contact Map | 0.915 |
| 3plxB | 1 | 0.8016 | 100 | 0.245 | Contact Map | 0.731 |
| 1uheA | 1 | 0.7698 | 100 | 0.276 | Contact Map | 0.708 |
| 3plxA | 1 | 0.1905 | 99.1 | 0.781 | Contact Map | 1 |
| 1vc3A | 1 | 0.1905 | 99.1 | 0.781 | Contact Map | 1 |
| 1uheB | 1 | 0.1905 | 99.1 | 0.781 | Contact Map | 1 |
| 1cz4A | 1 | 0.9206 | 82.4 | 0.918 | Contact Map | 0.415 |
Sequence Conservation (Image Generated using WebLogo v3)