| UniProt: | P0A742 | Sequence |
Download Alignment We filter this alignment to remove sites that have > 75% gaps before running GREMLIN. |
| EcoGene: | EG11180 | ||
| Length: | 136 (133) | ||
| Sequences: | 1246 | ||
| Seq/Len: | 9.37 |
| MSCL
Paralog alert: 0.02 [within 20: 0.00] - ratio of genomes with paralogs |
Legend: The darker and larger the blue dots, the higher coevolution strength.
Residue pairs sorted by coevolution strength:
| i | j | Scaled Score | Prob | |
| 5_K | 9_E | 3.415 | 1.00 | |
| 34_S | 38_A | 3.392 | 1.00 | |
| 6_E | 97_K | 2.552 | 1.00 | |
| 19_L | 23_V | 2.451 | 1.00 | |
| 31_K | 34_S | 2.263 | 1.00 | |
| 6_E | 100_N | 2.221 | 1.00 | |
| 117_K | 123_T | 2.172 | 1.00 | |
| 35_S | 39_D | 2.147 | 1.00 | |
| 117_K | 120_V | 2.125 | 1.00 | |
| 17_V | 99_I | 2.123 | 1.00 | |
| 90_F | 94_M | 2.105 | 1.00 | |
| 36_L | 40_I | 2.069 | 1.00 | |
| 40_I | 73_M | 1.993 | 1.00 | |
| 74_H | 77_V | 1.973 | 1.00 | |
| 57_F | 75_Y | 1.797 | 1.00 | |
| 65_Q | 68_I | 1.774 | 1.00 | |
| 19_L | 22_G | 1.759 | 1.00 | |
| 30_G | 34_S | 1.685 | 1.00 | |
| 6_E | 93_F | 1.594 | 1.00 | |
| 124_E | 130_K | 1.561 | 1.00 | |
| 36_L | 78_F | 1.549 | 1.00 | |
| 116_T | 119_E | 1.536 | 1.00 | |
| 58_A | 72_V | 1.535 | 1.00 | |
| 80_Q | 84_D | 1.491 | 1.00 | |
| 31_K | 84_D | 1.363 | 0.99 | |
| 114_A | 120_V | 1.362 | 0.99 | |
| 119_E | 123_T | 1.359 | 0.99 | |
| 39_D | 77_V | 1.349 | 0.99 | |
| 66_G | 69_P | 1.345 | 0.99 | |
| 11_A | 89_A | 1.309 | 0.99 | |
| 3_I | 90_F | 1.296 | 0.99 | |
| 65_Q | 69_P | 1.278 | 0.99 | |
| 124_E | 127_D | 1.27 | 0.99 | |
| 84_D | 88_V | 1.268 | 0.98 | |
| 23_V | 30_G | 1.268 | 0.98 | |
| 93_F | 97_K | 1.265 | 0.98 | |
| 62_R | 71_V | 1.257 | 0.98 | |
| 9_E | 104_R | 1.25 | 0.98 | |
| 9_E | 100_N | 1.246 | 0.98 | |
| 54_F | 79_I | 1.245 | 0.98 | |
| 3_I | 94_M | 1.244 | 0.98 | |
| 34_S | 84_D | 1.238 | 0.98 | |
| 123_T | 128_L | 1.226 | 0.98 | |
| 35_S | 78_F | 1.225 | 0.98 | |
| 11_A | 86_L | 1.218 | 0.98 | |
| 16_V | 36_L | 1.197 | 0.98 | |
| 2_S | 5_K | 1.195 | 0.98 | |
| 32_I | 82_V | 1.177 | 0.97 | |
| 75_Y | 79_I | 1.176 | 0.97 | |
| 17_V | 95_A | 1.164 | 0.97 | |
| 34_S | 37_V | 1.103 | 0.96 | |
| 115_P | 118_E | 1.098 | 0.95 | |
| 18_D | 21_V | 1.097 | 0.95 | |
| 39_D | 81_N | 1.085 | 0.95 | |
| 22_G | 100_N | 1.084 | 0.95 | |
| 68_I | 71_V | 1.075 | 0.95 | |
| 42_M | 46_G | 1.064 | 0.94 | |
| 80_Q | 88_V | 1.06 | 0.94 | |
| 121_L | 126_R | 1.044 | 0.94 | |
| 12_M | 16_V | 1.005 | 0.92 | |
| 128_L | 131_E | 1.001 | 0.92 |
- Text file of predictions (all 3L/2 predictions)
- Generate restraints for ROSETTA Structure Modeling
Legend: Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on 10 HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.
| PDB | Chains | Cov | P(%) | HHΔ | Acc | |
| 2oarA | 5 | 0.9485 | 100 | 0.107 | Contact Map | 0.51 |
| 3hzqA | 1 | 0.6985 | 100 | 0.276 | Contact Map | 0.298 |
| 4lkuA | 5 | 0.2132 | 96.6 | 0.856 | Contact Map | 0.677 |
| 2kluA | 1 | 0.4191 | 17.2 | 0.94 | Contact Map | 0.447 |
| 2yfvC | 1 | 0.1838 | 12.2 | 0.944 | Contact Map | 0.234 |
| 1b9uA | 1 | 0.2426 | 10.5 | 0.946 | Contact Map | 0.064 |
| 2zy9A | 2 | 0.6691 | 6.5 | 0.951 | Contact Map | 0.165 |
| 3lw5I | 1 | 0.2206 | 3.7 | 0.956 | Contact Map | 0.124 |
| 4h33A | 1 | 0.8456 | 3.3 | 0.957 | Contact Map | 0.136 |
| 2nwlA | 3 | 0.9044 | 2.8 | 0.959 | Contact Map | 0.149 |
Sequence Conservation (Image Generated using WebLogo v3)