| UniProt: | P0A6T9 | Sequence |
Download Alignment We filter this alignment to remove sites that have > 75% gaps before running GREMLIN. |
| EcoGene: | EG10371 | ||
| Length: | 129 (128) | ||
| Sequences: | 1850 | ||
| Seq/Len: | 14.45 |
| GCSH
Paralog alert: 0.14 [within 20: 0.01] - ratio of genomes with paralogs |
Legend: The darker and larger the blue dots, the higher coevolution strength.
Residue pairs sorted by coevolution strength:
| i | j | Scaled Score | Prob | |
| 118_D | 121_A | 4.56 | 1.00 | |
| 95_E | 98_A | 3.99 | 1.00 | |
| 77_E | 106_K | 3.965 | 1.00 | |
| 58_C | 103_F | 3.194 | 1.00 | |
| 80_A | 104_K | 2.658 | 1.00 | |
| 26_T | 104_K | 2.637 | 1.00 | |
| 75_S | 112_E | 2.512 | 1.00 | |
| 31_E | 34_Q | 2.408 | 1.00 | |
| 111_S | 114_E | 2.277 | 1.00 | |
| 52_V | 72_A | 1.995 | 1.00 | |
| 51_T | 77_E | 1.914 | 1.00 | |
| 109_D | 112_E | 1.908 | 1.00 | |
| 51_T | 108_S | 1.884 | 1.00 | |
| 117_L | 125_L | 1.871 | 1.00 | |
| 88_S | 91_L | 1.802 | 1.00 | |
| 95_E | 99_G | 1.801 | 1.00 | |
| 92_V | 102_I | 1.781 | 1.00 | |
| 25_Y | 107_A | 1.73 | 1.00 | |
| 53_S | 56_D | 1.717 | 1.00 | |
| 58_C | 70_I | 1.621 | 1.00 | |
| 60_V | 67_A | 1.614 | 1.00 | |
| 24_T | 104_K | 1.613 | 1.00 | |
| 31_E | 35_E | 1.611 | 1.00 | |
| 54_A | 115_S | 1.605 | 1.00 | |
| 22_D | 106_K | 1.556 | 1.00 | |
| 85_L | 102_I | 1.542 | 1.00 | |
| 59_A | 70_I | 1.53 | 1.00 | |
| 84_A | 88_S | 1.524 | 1.00 | |
| 17_L | 25_Y | 1.5 | 1.00 | |
| 19_K | 25_Y | 1.497 | 1.00 | |
| 123_E | 127_E | 1.496 | 1.00 | |
| 8_L | 97_Y | 1.48 | 1.00 | |
| 74_V | 107_A | 1.469 | 1.00 | |
| 91_L | 100_G | 1.466 | 1.00 | |
| 119_A | 123_E | 1.443 | 1.00 | |
| 8_L | 18_R | 1.44 | 1.00 | |
| 12_K | 125_L | 1.41 | 1.00 | |
| 53_S | 75_S | 1.369 | 0.99 | |
| 34_Q | 93_N | 1.351 | 0.99 | |
| 49_G | 77_E | 1.346 | 0.99 | |
| 50_A | 56_D | 1.299 | 0.99 | |
| 60_V | 64_V | 1.296 | 0.99 | |
| 15_E | 64_V | 1.27 | 0.99 | |
| 47_E | 50_A | 1.266 | 0.99 | |
| 18_R | 26_T | 1.244 | 0.98 | |
| 24_T | 106_K | 1.242 | 0.98 | |
| 41_V | 64_V | 1.21 | 0.98 | |
| 88_S | 94_S | 1.205 | 0.98 | |
| 45_L | 81_V | 1.197 | 0.98 | |
| 124_A | 127_E | 1.197 | 0.98 | |
| 83_D | 87_D | 1.186 | 0.98 | |
| 57_D | 69_D | 1.179 | 0.98 | |
| 52_V | 58_C | 1.168 | 0.97 | |
| 6_A | 120_T | 1.15 | 0.97 | |
| 84_A | 99_G | 1.15 | 0.97 | |
| 80_A | 83_D | 1.136 | 0.97 | |
| 84_A | 91_L | 1.08 | 0.95 | |
| 19_K | 113_L | 1.079 | 0.95 | |
| 110_E | 114_E | 1.067 | 0.95 | |
| 48_V | 81_V | 1.06 | 0.95 | |
| 84_A | 87_D | 1.047 | 0.94 | |
| 45_L | 102_I | 1.032 | 0.94 | |
| 32_H | 36_L | 1.029 | 0.94 | |
| 19_K | 110_E | 1.028 | 0.94 | |
| 74_V | 105_I | 1.007 | 0.93 |
- Text file of predictions (all 3L/2 predictions)
- Generate restraints for ROSETTA Structure Modeling
Legend: Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on 10 HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.
| PDB | Chains | Cov | P(%) | HHΔ | Acc | |
| 3hgbA | 1 | 0.9922 | 100 | 0.069 | Contact Map | 0.65 |
| 3mxuA | 1 | 0.969 | 100 | 0.13 | Contact Map | 0.688 |
| 3a7lA | 1 | 0.9922 | 100 | 0.157 | Contact Map | 0.726 |
| 1hpcA | 2 | 0.9845 | 100 | 0.162 | Contact Map | 0.818 |
| 3tzuA | 4 | 0.969 | 100 | 0.171 | Contact Map | 0.787 |
| 3klrA | 1 | 0.9535 | 100 | 0.192 | Contact Map | 0.814 |
| 3wdnA | 1 | 0.9535 | 100 | 0.192 | Contact Map | 0.806 |
| 1onlA | 3 | 0.9845 | 100 | 0.211 | Contact Map | 0.851 |
| 1zkoA | 2 | 0.9922 | 100 | 0.224 | Contact Map | 0.854 |
| 1gjxA | 1 | 0.6279 | 96.5 | 0.839 | Contact Map | 0.608 |
Sequence Conservation (Image Generated using WebLogo v3)