| UniProt: | P0A6I0 | Sequence |
Download Alignment We filter this alignment to remove sites that have > 75% gaps before running GREMLIN. |
| EcoGene: | EG11265 | ||
| Length: | 227 (219) | ||
| Sequences: | 1721 | ||
| Seq/Len: | 7.86 |
| KCY
Paralog alert: 0.01 [within 20: 0.00] - ratio of genomes with paralogs |
Legend: The darker and larger the blue dots, the higher coevolution strength.
Residue pairs sorted by coevolution strength:
| i | j | Scaled Score | Prob | |
| 183_D | 187_N | 4.571 | 1.00 | |
| 195_P | 201_V | 3.998 | 1.00 | |
| 49_H | 85_E | 2.934 | 1.00 | |
| 135_T | 196_A | 2.924 | 1.00 | |
| 56_S | 59_A | 2.722 | 1.00 | |
| 156_H | 160_L | 2.452 | 1.00 | |
| 152_E | 175_L | 2.415 | 1.00 | |
| 153_E | 205_T | 2.397 | 1.00 | |
| 171_F | 175_L | 2.337 | 1.00 | |
| 44_A | 100_A | 2.309 | 1.00 | |
| 153_E | 156_H | 2.253 | 1.00 | |
| 7_V | 138_F | 2.191 | 1.00 | |
| 45_L | 49_H | 2.137 | 1.00 | |
| 79_E | 86_D | 2.134 | 1.00 | |
| 208_S | 211_Q | 2.1 | 1.00 | |
| 143_V | 219_Y | 2.078 | 1.00 | |
| 20_T | 209_I | 2.072 | 1.00 | |
| 45_L | 82_L | 2.056 | 1.00 | |
| 57_E | 106_F | 2.037 | 1.00 | |
| 204_S | 212_V | 2.035 | 1.00 | |
| 57_E | 108_R | 1.993 | 1.00 | |
| 9_T | 133_M | 1.991 | 1.00 | |
| 44_A | 99_A | 1.988 | 1.00 | |
| 159_M | 163_Q | 1.985 | 1.00 | |
| 121_R | 138_F | 1.965 | 1.00 | |
| 46_A | 83_E | 1.917 | 1.00 | |
| 207_L | 215_K | 1.884 | 1.00 | |
| 146_F | 186_R | 1.883 | 1.00 | |
| 176_A | 180_E | 1.828 | 1.00 | |
| 48_L | 96_V | 1.824 | 1.00 | |
| 180_E | 184_R | 1.805 | 1.00 | |
| 25_M | 216_A | 1.768 | 1.00 | |
| 94_Q | 97_A | 1.762 | 1.00 | |
| 128_A | 133_M | 1.728 | 1.00 | |
| 24_A | 28_A | 1.716 | 1.00 | |
| 47_A | 60_L | 1.696 | 1.00 | |
| 100_A | 184_R | 1.668 | 1.00 | |
| 39_I | 114_L | 1.666 | 1.00 | |
| 24_A | 213_I | 1.64 | 1.00 | |
| 97_A | 100_A | 1.636 | 1.00 | |
| 145_I | 219_Y | 1.633 | 1.00 | |
| 34_L | 128_A | 1.624 | 1.00 | |
| 61_V | 108_R | 1.616 | 1.00 | |
| 21_L | 213_I | 1.594 | 1.00 | |
| 215_K | 218_Q | 1.583 | 1.00 | |
| 188_R | 192_P | 1.553 | 1.00 | |
| 175_L | 179_K | 1.534 | 1.00 | |
| 116_R | 119_A | 1.528 | 1.00 | |
| 112_A | 116_R | 1.501 | 0.99 | |
| 170_N | 173_R | 1.499 | 0.99 | |
| 151_S | 179_K | 1.487 | 0.99 | |
| 113_L | 117_Q | 1.475 | 0.99 | |
| 48_L | 99_A | 1.443 | 0.99 | |
| 38_A | 91_I | 1.42 | 0.99 | |
| 176_A | 179_K | 1.408 | 0.99 | |
| 29_L | 217_L | 1.401 | 0.99 | |
| 180_E | 183_D | 1.398 | 0.99 | |
| 115_R | 119_A | 1.381 | 0.99 | |
| 107_P | 111_E | 1.375 | 0.99 | |
| 143_V | 220_A | 1.374 | 0.99 | |
| 31_W | 125_G | 1.374 | 0.99 | |
| 145_I | 216_A | 1.369 | 0.99 | |
| 25_M | 213_I | 1.354 | 0.99 | |
| 45_L | 87_V | 1.34 | 0.99 | |
| 68_D | 83_E | 1.339 | 0.99 | |
| 62_P | 66_H | 1.338 | 0.99 | |
| 135_T | 194_V | 1.311 | 0.98 | |
| 115_R | 118_R | 1.305 | 0.98 | |
| 160_L | 163_Q | 1.296 | 0.98 | |
| 46_A | 67_L | 1.294 | 0.98 | |
| 46_A | 50_H | 1.292 | 0.98 | |
| 47_A | 63_L | 1.28 | 0.98 | |
| 211_Q | 214_E | 1.256 | 0.98 | |
| 151_S | 175_L | 1.242 | 0.97 | |
| 25_M | 217_L | 1.242 | 0.97 | |
| 107_P | 190_V | 1.217 | 0.97 | |
| 136_V | 191_A | 1.215 | 0.97 | |
| 147_L | 204_S | 1.204 | 0.97 | |
| 82_L | 87_V | 1.184 | 0.96 | |
| 21_L | 216_A | 1.183 | 0.96 | |
| 214_E | 218_Q | 1.174 | 0.96 | |
| 153_E | 206_T | 1.172 | 0.96 | |
| 28_A | 217_L | 1.169 | 0.96 | |
| 10_I | 22_C | 1.168 | 0.96 | |
| 148_D | 186_R | 1.151 | 0.95 | |
| 28_A | 214_E | 1.123 | 0.95 | |
| 159_M | 169_V | 1.122 | 0.95 | |
| 35_D | 92_R | 1.107 | 0.94 | |
| 200_L | 219_Y | 1.106 | 0.94 | |
| 161_Q | 165_K | 1.104 | 0.94 | |
| 179_K | 183_D | 1.093 | 0.93 | |
| 34_L | 120_F | 1.091 | 0.93 | |
| 70_R | 84_G | 1.089 | 0.93 | |
| 64_A | 112_A | 1.088 | 0.93 | |
| 133_M | 138_F | 1.084 | 0.93 | |
| 35_D | 38_A | 1.082 | 0.93 | |
| 202_L | 216_A | 1.067 | 0.92 | |
| 8_I | 220_A | 1.056 | 0.92 | |
| 119_A | 122_E | 1.052 | 0.92 | |
| 215_K | 219_Y | 1.048 | 0.91 | |
| 39_I | 113_L | 1.034 | 0.91 | |
| 29_L | 221_R | 1.027 | 0.90 | |
| 114_L | 191_A | 1.027 | 0.90 | |
| 98_N | 177_E | 1.02 | 0.90 |
- Text file of predictions (all 3L/2 predictions)
- Generate restraints for ROSETTA Structure Modeling
Legend: Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on 10 HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.
| PDB | Chains | Cov | P(%) | HHΔ | Acc | |
| 3r20A | 1 | 1 | 100 | 0.497 | Contact Map | 0.751 |
| 1ckeA | 1 | 1 | 100 | 0.5 | Contact Map | 0.788 |
| 4e22A | 1 | 1 | 100 | 0.514 | Contact Map | 0.843 |
| 2h92A | 3 | 0.9604 | 100 | 0.567 | Contact Map | 0.895 |
| 1q3tA | 1 | 0.9868 | 100 | 0.571 | Contact Map | 0.6 |
| 3akeA | 1 | 0.9163 | 100 | 0.579 | Contact Map | 0.759 |
| 1a7jA | 1 | 0.9031 | 100 | 0.666 | Contact Map | 0.268 |
| 3fdiA | 2 | 0.8326 | 99.9 | 0.74 | Contact Map | 0.696 |
| 3hdtA | 2 | 0.8855 | 99.9 | 0.74 | Contact Map | 0.823 |
| 2grjA | 8 | 0.8018 | 99.8 | 0.755 | Contact Map | 0.651 |
Sequence Conservation (Image Generated using WebLogo v3)