|
| Genes: |
A |
B |
A+B |
| Length: |
390 |
295 |
|
| Sequences: |
25 |
22 |
|
| Seq/Len: |
0.06 |
0.07 |
|
|
|
HHblits results
Sequence A: (Date: 2015_06) BEFORE and AFTER the coverage filter was applied, to remove sequences that don't cover at least 75% of query length. Regions above red line, indicates positions where there is > 5 sequences per length (if visible, green bar = 20 seq/len). Point of this graphic is to give you an idea if resubmitting a sub-portion of your sequence might help increase the overall Seq/Len.
Sequence B: (Date: 2015_06) BEFORE and AFTER the coverage filter was applied, to remove sequences that don't cover at least 75% of query length. Regions above red line, indicates positions where there is > 5 sequences per length (if visible, green bar = 20 seq/len). Point of this graphic is to give you an idea if resubmitting a sub-portion of your sequence might help increase the overall Seq/Len.
[Show HHblits results] - Maybe useful in deciding what regions to trim. |
|
Paired alignment generation
|
| ID |
Seq/Len |
Name |
Options |
I_Prob |
Status |
| 14348 |
0.03 |
PopD_PopB |
Δgene:(1, 20) A:(1E-02, 8) B:(1E-02, 8) msa: HHblits (2015_06)
|
|
Killed - Shared |
| 14345 |
|
translocon |
Δgene:(1, 20) A:(1E-20, 8) B:(1E-20, 8) msa: HHblits (2015_06)
|
|
Running |
| 9186 |
0.03 |
PopB - PopD |
Δgene:(1, ∞) A:(1E-02, 8) B:(1E-02, 8) msa: HHblits (2015_06)
|
|
Killed - Shared |
| 9178 |
0.03 |
PopB - PopD |
Δgene:(1, ∞) A:(1E-06, 8) B:(1E-06, 8) msa: HHblits (2015_06)
|
|
Killed - Shared |
| 9159 |
0.05 |
PopB - PopD |
Δgene:(1, ∞) A:(1E-20, 8) B:(1E-20, 8) msa: Jackhmmer (r132)
|
|
Killed - Shared |