May 4, 2021 - We are working on upgrading the webserver, some pages may not work.
OPENSEQ.org

YHBS - YRAN
UniProt:
Length: 298
Sequences: 574
Seq/Len: 2.03
I_Prob: 0.01
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
3_I 81_T 1.10 0.01
45_V 92_A 0.92 0.00
8_P 123_I 0.92 0.00
52_Q 39_I 0.87 0.00
49_D 37_R 0.85 0.00
88_L 112_V 0.81 0.00
45_V 74_G 0.79 0.00
108_V 127_F 0.75 0.00
114_P 115_F 0.74 0.00
93_V 86_H 0.74 0.00
114_P 85_Q 0.74 0.00
61_P 125_D 0.74 0.00
20_R 113_V 0.74 0.00
21_S 46_R 0.74 0.00
15_D 79_S 0.73 0.00
102_E 123_I 0.73 0.00
57_V 95_W 0.73 0.00
60_S 86_H 0.71 0.00
90_R 34_K 0.71 0.00
48_D 88_L 0.71 0.00
85_G 94_L 0.71 0.00
155_T 123_I 0.71 0.00
128_H 42_N 0.71 0.00
158_V 33_G 0.69 0.00
80_D 39_I 0.69 0.00
142_Q 86_H 0.69 0.00
141_F 80_V 0.69 0.00
55_G 74_G 0.68 0.00
17_L 72_L 0.68 0.00
18_L 60_T 0.68 0.00
3_I 123_I 0.68 0.00
93_V 41_A 0.67 0.00
21_S 26_Q 0.67 0.00
2_L 25_A 0.67 0.00
17_L 75_G 0.66 0.00
143_V 40_A 0.66 0.00
102_E 125_D 0.65 0.00
44_L 62_F 0.65 0.00
84_R 60_T 0.65 0.00
115_A 120_V 0.65 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

Page generated in 0.0248 seconds.