May 4, 2021 - We are working on upgrading the webserver, some pages may not work.
OPENSEQ.org

YGFA - YGGE
UniProt:
Length: 428
Sequences: 851
Seq/Len: 2.09
I_Prob: 0.08
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
113_L 177_H 1.30 0.08
133_F 73_I 1.21 0.07
174_V 221_Q 1.11 0.05
87_L 94_Q 1.00 0.03
176_P 158_R 0.97 0.03
173_V 182_P 0.90 0.02
149_V 210_S 0.89 0.02
115_T 124_K 0.88 0.02
37_V 36_A 0.88 0.02
96_E 143_V 0.87 0.02
20_Q 78_L 0.87 0.02
87_L 88_S 0.86 0.02
5_R 143_V 0.85 0.02
49_T 180_L 0.85 0.02
104_V 114_T 0.85 0.02
60_G 121_Q 0.84 0.02
83_P 185_S 0.83 0.02
161_L 68_R 0.83 0.02
81_Y 91_L 0.82 0.02
76_L 111_A 0.81 0.02
175_T 40_A 0.81 0.02
170_L 154_K 0.81 0.02
92_L 74_S 0.81 0.02
164_E 91_L 0.80 0.02
139_Q 149_Q 0.80 0.02
173_V 147_V 0.78 0.02
62_R 205_D 0.78 0.01
99_L 33_S 0.77 0.01
129_M 62_K 0.77 0.01
136_R 130_D 0.76 0.01
112_V 232_L 0.76 0.01
150_G 136_G 0.75 0.01
162_P 117_V 0.75 0.01
131_G 224_D 0.75 0.01
94_I 36_A 0.74 0.01
48_D 26_D 0.74 0.01
63_V 232_L 0.74 0.01
51_P 195_P 0.74 0.01
16_E 173_A 0.73 0.01
3_R 168_Q 0.73 0.01
182_W 38_V 0.73 0.01
17_M 47_L 0.73 0.01
80_N 125_L 0.73 0.01
61_K 98_D 0.73 0.01
127_L 117_V 0.72 0.01
56_L 111_A 0.72 0.01
136_R 118_T 0.72 0.01
25_M 81_I 0.72 0.01
174_V 162_I 0.72 0.01
47_L 156_K 0.72 0.01
148_P 122_L 0.72 0.01
94_I 82_A 0.71 0.01
48_D 70_A 0.71 0.01
131_G 106_L 0.71 0.01
63_V 183_V 0.71 0.01
52_L 40_A 0.71 0.01
92_L 142_S 0.70 0.01
49_T 176_F 0.70 0.01
53_I 216_E 0.69 0.01
3_R 113_R 0.69 0.01
68_L 203_K 0.69 0.01
76_L 167_H 0.69 0.01
35_H 36_A 0.69 0.01
9_L 140_I 0.69 0.01
176_P 90_N 0.69 0.01
113_L 226_V 0.69 0.01
112_V 104_S 0.69 0.01
68_L 224_D 0.69 0.01
117_L 91_L 0.69 0.01
124_G 34_G 0.69 0.01
149_V 228_V 0.69 0.01
16_E 112_V 0.68 0.01
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

Page generated in 0.0328 seconds.