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OPENSEQ.org

TRPA - YCII
UniProt:
Length: 366
Sequences: 728
Seq/Len: 2.01
I_Prob: 0.05
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
223_A 12_D 1.27 0.05
3_R 71_A 1.12 0.03
6_S 69_E 1.06 0.03
62_P 67_S 1.06 0.03
120_K 77_A 1.03 0.03
255_L 47_D 0.96 0.02
252_L 3_Y 0.91 0.02
54_F 9_D 0.90 0.02
19_F 37_L 0.87 0.01
221_K 67_S 0.86 0.01
129_A 9_D 0.86 0.01
13_E 33_D 0.85 0.01
151_I 23_A 0.84 0.01
81_C 84_G 0.83 0.01
75_G 48_S 0.83 0.01
8_F 25_L 0.81 0.01
164_R 70_A 0.80 0.01
67_A 28_L 0.80 0.01
166_I 70_A 0.79 0.01
82_F 19_S 0.78 0.01
174_T 70_A 0.78 0.01
241_I 68_L 0.77 0.01
133_V 11_A 0.76 0.01
158_A 23_A 0.76 0.01
100_L 58_G 0.75 0.01
145_R 62_I 0.75 0.01
238_V 83_A 0.75 0.01
121_V 12_D 0.74 0.01
40_L 62_I 0.73 0.01
9_A 69_E 0.73 0.01
93_P 72_Q 0.73 0.01
68_T 3_Y 0.73 0.01
238_V 69_E 0.72 0.01
147_N 84_G 0.71 0.01
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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