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OPENSEQ.org

SECF - SECY
UniProt:
Length: 766
Sequences: 1421
Seq/Len: 1.93
I_Prob: 0.32
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
203_L 88_A 1.47 0.32
23_D 243_R 1.23 0.17
206_V 82_I 1.17 0.14
215_I 286_F 1.17 0.14
73_D 162_V 1.10 0.11
259_I 283_I 1.08 0.11
297_L 353_V 1.07 0.10
106_G 225_V 1.05 0.10
34_L 306_I 1.03 0.09
183_I 118_Q 1.02 0.09
35_I 224_A 1.02 0.09
249_L 379_L 1.01 0.08
235_E 55_Q 1.01 0.08
32_L 379_L 0.98 0.07
26_A 243_R 0.98 0.07
37_A 196_V 0.97 0.07
263_Y 41_I 0.97 0.07
200_V 333_T 0.97 0.07
268_P 384_I 0.96 0.07
110_L 326_I 0.96 0.07
265_F 272_A 0.95 0.07
118_I 235_V 0.95 0.07
161_V 190_I 0.94 0.07
146_G 373_L 0.93 0.06
146_G 346_L 0.92 0.06
183_I 155_A 0.92 0.06
291_V 272_A 0.91 0.06
308_Q 18_E 0.91 0.06
296_A 71_A 0.88 0.05
188_L 433_L 0.88 0.05
143_A 243_R 0.87 0.05
123_N 161_V 0.87 0.05
218_S 420_V 0.87 0.05
35_I 379_L 0.87 0.05
286_A 28_G 0.86 0.05
198_T 405_S 0.86 0.05
96_V 162_V 0.86 0.05
158_L 128_A 0.86 0.05
260_L 222_L 0.86 0.05
187_I 224_A 0.86 0.05
34_L 330_F 0.85 0.04
268_P 291_A 0.85 0.04
170_A 409_V 0.84 0.04
72_R 189_I 0.84 0.04
32_L 162_V 0.84 0.04
178_A 21_R 0.84 0.04
160_Y 358_P 0.84 0.04
174_V 292_S 0.83 0.04
128_V 87_S 0.83 0.04
71_M 221_L 0.83 0.04
137_S 366_I 0.83 0.04
216_V 22_R 0.83 0.04
73_D 58_G 0.83 0.04
187_I 201_P 0.82 0.04
126_A 47_A 0.82 0.04
48_W 23_L 0.82 0.04
136_P 62_E 0.82 0.04
42_G 221_L 0.82 0.04
146_G 272_A 0.81 0.04
35_I 306_I 0.81 0.04
38_I 77_I 0.81 0.04
257_M 405_S 0.81 0.04
183_I 77_I 0.81 0.04
161_V 198_G 0.81 0.04
70_V 158_F 0.80 0.04
239_V 256_R 0.80 0.04
44_R 384_I 0.80 0.04
49_G 325_I 0.80 0.04
242_T 286_F 0.80 0.04
278_L 250_K 0.80 0.04
241_L 78_F 0.79 0.04
67_E 356_I 0.79 0.04
79_G 246_V 0.79 0.04
155_L 323_S 0.79 0.04
224_N 326_I 0.79 0.04
141_D 106_K 0.79 0.03
253_G 50_A 0.79 0.03
17_Y 198_G 0.79 0.03
274_S 22_R 0.79 0.03
37_A 261_Q 0.79 0.03
240_S 393_D 0.78 0.03
147_A 319_L 0.78 0.03
175_I 159_T 0.78 0.03
296_A 189_I 0.78 0.03
97_R 98_V 0.78 0.03
296_A 430_E 0.78 0.03
286_A 136_A 0.77 0.03
38_I 265_L 0.77 0.03
51_D 45_D 0.77 0.03
77_K 47_A 0.77 0.03
58_I 265_L 0.77 0.03
76_Q 323_S 0.77 0.03
205_S 26_V 0.77 0.03
170_A 347_K 0.77 0.03
149_A 134_G 0.77 0.03
49_G 248_Y 0.77 0.03
221_I 2_A 0.77 0.03
174_V 183_I 0.77 0.03
278_L 44_I 0.76 0.03
39_V 130_F 0.76 0.03
37_A 406_L 0.76 0.03
163_F 155_A 0.76 0.03
186_G 363_A 0.76 0.03
237_F 232_F 0.76 0.03
135_G 391_M 0.76 0.03
113_Q 223_V 0.76 0.03
10_L 223_V 0.75 0.03
36_A 23_L 0.75 0.03
262_L 159_T 0.75 0.03
57_V 371_T 0.75 0.03
150_L 60_I 0.75 0.03
245_L 284_I 0.75 0.03
190_L 78_F 0.75 0.03
202_S 132_S 0.75 0.03
138_V 107_K 0.75 0.03
46_F 420_V 0.75 0.03
130_R 417_M 0.75 0.03
191_F 222_L 0.75 0.03
141_D 135_I 0.75 0.03
209_Y 396_K 0.74 0.03
166_E 190_I 0.74 0.03
137_S 68_S 0.74 0.03
70_V 225_V 0.74 0.03
62_L 77_I 0.74 0.03
69_D 320_L 0.74 0.03
158_L 243_R 0.74 0.03
38_I 54_E 0.74 0.03
60_I 197_A 0.74 0.03
46_F 76_S 0.74 0.03
86_Q 72_L 0.74 0.03
132_E 230_V 0.74 0.03
170_A 259_A 0.74 0.03
165_F 406_L 0.74 0.03
190_L 379_L 0.74 0.03
203_L 255_R 0.73 0.03
23_D 433_L 0.73 0.03
159_V 49_L 0.73 0.03
291_V 130_F 0.73 0.03
272_G 119_Y 0.73 0.03
20_M 132_S 0.73 0.03
252_S 80_L 0.73 0.03
168_R 370_M 0.73 0.03
79_G 326_I 0.73 0.03
275_L 283_I 0.73 0.03
175_I 369_V 0.73 0.03
97_R 405_S 0.73 0.03
25_W 237_V 0.73 0.03
292_A 387_I 0.72 0.03
140_A 45_D 0.72 0.03
249_L 129_I 0.72 0.03
73_D 378_A 0.72 0.03
105_T 99_H 0.72 0.03
226_R 159_T 0.72 0.03
36_A 126_V 0.72 0.03
207_I 25_F 0.72 0.03
200_V 353_V 0.72 0.03
202_S 191_I 0.72 0.03
215_I 76_S 0.72 0.03
199_I 180_E 0.71 0.03
299_L 128_A 0.71 0.03
63_E 203_I 0.71 0.03
264_L 142_M 0.71 0.03
170_A 136_A 0.71 0.03
161_V 378_A 0.71 0.03
305_H 26_V 0.71 0.02
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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