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OPENSEQ.org

SECA - SECY
UniProt:
Length: 1344
Sequences: 1560
Seq/Len: 1.17
I_Prob: 0.01
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
788_G 263_T 1.39 0.01
205_Y 221_L 1.13 0.01
205_Y 244_I 1.06 0.01
172_A 162_V 1.06 0.01
427_V 218_L 1.06 0.01
18_L 92_I 1.03 0.00
791_L 246_V 1.03 0.00
595_M 63_M 1.03 0.00
325_D 171_L 0.99 0.00
129_V 132_S 0.97 0.00
388_A 39_I 0.94 0.00
214_I 39_I 0.94 0.00
142_N 92_I 0.93 0.00
795_A 265_L 0.92 0.00
803_Y 82_I 0.92 0.00
435_I 132_S 0.91 0.00
793_G 250_K 0.90 0.00
410_V 341_E 0.90 0.00
626_A 88_A 0.89 0.00
702_D 32_V 0.88 0.00
427_V 256_R 0.87 0.00
427_V 240_G 0.86 0.00
84_F 132_S 0.86 0.00
174_I 61_I 0.86 0.00
676_I 323_S 0.86 0.00
20_R 183_I 0.86 0.00
129_V 384_I 0.86 0.00
51_R 356_I 0.85 0.00
428_Y 118_Q 0.85 0.00
793_G 265_L 0.84 0.00
18_L 168_T 0.84 0.00
549_L 369_V 0.84 0.00
745_E 306_I 0.84 0.00
276_E 272_A 0.83 0.00
587_Y 128_A 0.83 0.00
644_Q 81_G 0.83 0.00
205_Y 119_Y 0.83 0.00
447_A 32_V 0.83 0.00
205_Y 423_L 0.83 0.00
28_I 221_L 0.83 0.00
786_R 23_L 0.82 0.00
750_K 22_R 0.82 0.00
612_M 240_G 0.82 0.00
609_K 92_I 0.82 0.00
197_E 44_I 0.81 0.00
401_F 319_L 0.81 0.00
409_T 284_I 0.81 0.00
229_A 257_V 0.81 0.00
814_M 57_R 0.81 0.00
575_S 306_I 0.81 0.00
438_I 166_T 0.80 0.00
415_N 311_Q 0.80 0.00
166_K 317_Y 0.79 0.00
70_V 164_L 0.79 0.00
610_L 387_I 0.79 0.00
702_D 116_I 0.79 0.00
546_D 45_D 0.79 0.00
556_I 425_M 0.78 0.00
691_Y 126_V 0.78 0.00
647_E 170_F 0.78 0.00
375_I 218_L 0.78 0.00
601_D 82_I 0.78 0.00
587_Y 290_I 0.78 0.00
36_E 102_L 0.78 0.00
557_I 364_K 0.77 0.00
648_Y 129_I 0.77 0.00
873_Q 265_L 0.77 0.00
827_S 366_I 0.77 0.00
205_Y 379_L 0.77 0.00
140_A 416_F 0.77 0.00
328_V 33_F 0.76 0.00
332_E 148_L 0.76 0.00
214_I 379_L 0.76 0.00
166_K 209_Q 0.76 0.00
701_W 127_L 0.76 0.00
21_M 235_V 0.76 0.00
477_N 33_F 0.76 0.00
58_E 262_S 0.76 0.00
370_Q 334_A 0.76 0.00
216_I 384_I 0.76 0.00
470_T 265_L 0.76 0.00
154_V 132_S 0.75 0.00
428_Y 77_I 0.75 0.00
290_G 88_A 0.75 0.00
140_A 370_M 0.75 0.00
491_V 224_A 0.75 0.00
24_V 196_V 0.75 0.00
115_P 295_G 0.75 0.00
84_F 166_T 0.75 0.00
830_Q 229_A 0.75 0.00
171_A 181_R 0.75 0.00
230_E 384_I 0.74 0.00
657_R 132_S 0.74 0.00
48_A 222_L 0.74 0.00
755_G 190_I 0.74 0.00
353_L 128_A 0.74 0.00
388_A 54_E 0.74 0.00
797_K 139_L 0.74 0.00
838_E 95_L 0.74 0.00
116_A 74_R 0.74 0.00
38_L 378_A 0.73 0.00
299_Y 238_E 0.73 0.00
615_G 327_F 0.73 0.00
124_K 190_I 0.73 0.00
804_K 43_G 0.73 0.00
27_I 378_A 0.73 0.00
205_Y 225_V 0.73 0.00
63_L 222_L 0.73 0.00
15_D 333_T 0.72 0.00
23_K 96_T 0.72 0.00
737_E 256_R 0.72 0.00
556_I 180_E 0.72 0.00
786_R 249_A 0.72 0.00
752_E 379_L 0.72 0.00
39_S 384_I 0.71 0.00
830_Q 76_S 0.71 0.00
607_M 76_S 0.71 0.00
432_A 304_T 0.71 0.00
61_E 330_F 0.71 0.00
800_K 416_F 0.71 0.00
667_L 246_V 0.71 0.00
388_A 229_A 0.71 0.00
363_V 379_L 0.71 0.00
92_M 149_V 0.71 0.00
584_S 326_I 0.71 0.00
63_L 13_K 0.71 0.00
380_Y 351_A 0.71 0.00
812_A 341_E 0.71 0.00
336_V 375_L 0.71 0.00
149_F 82_I 0.71 0.00
783_D 243_R 0.71 0.00
208_V 203_I 0.71 0.00
19_R 221_L 0.70 0.00
195_P 256_R 0.70 0.00
457_I 258_Y 0.70 0.00
646_L 36_G 0.70 0.00
192_A 238_E 0.70 0.00
726_K 132_S 0.70 0.00
798_D 290_I 0.70 0.00
370_Q 117_S 0.70 0.00
645_L 87_S 0.70 0.00
588_L 67_F 0.70 0.00
807_S 269_V 0.70 0.00
41_E 225_V 0.70 0.00
357_V 136_A 0.69 0.00
197_E 310_L 0.69 0.00
157_N 227_V 0.69 0.00
491_V 125_L 0.69 0.00
50_F 291_A 0.69 0.00
810_M 440_G 0.69 0.00
633_K 73_S 0.69 0.00
124_K 230_V 0.69 0.00
459_I 163_S 0.69 0.00
63_L 345_N 0.69 0.00
146_L 66_M 0.69 0.00
827_S 105_I 0.69 0.00
735_L 387_I 0.69 0.00
520_Q 24_L 0.69 0.00
500_V 369_V 0.69 0.00
614_P 316_L 0.68 0.00
205_Y 162_V 0.68 0.00
448_K 269_V 0.68 0.00
19_R 223_V 0.68 0.00
627_I 166_T 0.68 0.00
276_E 114_R 0.68 0.00
639_F 116_I 0.68 0.00
25_V 340_R 0.68 0.00
246_L 45_D 0.68 0.00
609_K 158_F 0.68 0.00
4_K 190_I 0.68 0.00
477_N 330_F 0.68 0.00
365_I 81_G 0.68 0.00
609_K 73_S 0.68 0.00
840_L 77_I 0.67 0.00
240_N 183_I 0.67 0.00
124_K 162_V 0.67 0.00
2_L 420_V 0.67 0.00
370_Q 374_T 0.67 0.00
283_E 357_R 0.67 0.00
493_Q 320_L 0.67 0.00
30_A 38_F 0.67 0.00
241_K 33_F 0.67 0.00
454_V 35_I 0.67 0.00
200_Q 419_Q 0.67 0.00
365_I 231_T 0.67 0.00
362_G 319_L 0.67 0.00
383_L 91_I 0.67 0.00
646_L 403_G 0.67 0.00
627_I 76_S 0.67 0.00
805_R 329_C 0.67 0.00
38_L 45_D 0.67 0.00
23_K 49_L 0.67 0.00
9_V 203_I 0.67 0.00
640_D 335_L 0.67 0.00
51_R 226_L 0.67 0.00
28_I 23_L 0.67 0.00
771_L 193_A 0.67 0.00
351_D 87_S 0.67 0.00
659_I 38_F 0.67 0.00
263_F 297_G 0.67 0.00
444_E 24_L 0.66 0.00
678_S 290_I 0.66 0.00
671_D 323_S 0.66 0.00
757_E 168_T 0.66 0.00
205_Y 364_K 0.66 0.00
161_M 348_K 0.66 0.00
486_N 433_L 0.66 0.00
70_V 37_S 0.66 0.00
765_G 284_I 0.66 0.00
658_A 96_T 0.66 0.00
530_T 253_Q 0.66 0.00
197_E 190_I 0.66 0.00
543_V 201_P 0.66 0.00
300_S 353_V 0.66 0.00
585_R 59_T 0.66 0.00
153_T 228_F 0.66 0.00
465_V 383_F 0.66 0.00
803_Y 118_Q 0.66 0.00
2_L 370_M 0.66 0.00
335_I 20_K 0.66 0.00
409_T 51_K 0.65 0.00
382_R 194_G 0.65 0.00
12_S 330_F 0.65 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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