May 4, 2021 - We are working on upgrading the webserver, some pages may not work.
OPENSEQ.org

HEM4 - RHO
UniProt:
Length: 665
Sequences: 1380
Seq/Len: 2.08
I_Prob: 0.06
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
58_A 355_F 1.26 0.06
182_V 375_E 1.09 0.03
68_Q 119_V 0.96 0.02
59_L 359_D 0.92 0.02
195_S 321_I 0.83 0.01
243_R 194_S 0.83 0.01
233_A 33_D 0.82 0.01
188_E 286_T 0.81 0.01
31_L 178_A 0.81 0.01
95_L 140_H 0.80 0.01
215_S 386_I 0.80 0.01
215_S 156_D 0.80 0.01
244_A 411_D 0.79 0.01
58_A 187_L 0.78 0.01
215_S 19_E 0.78 0.01
215_S 10_P 0.78 0.01
89_R 205_M 0.78 0.01
29_F 385_K 0.78 0.01
11_A 329_E 0.77 0.01
87_I 72_Y 0.77 0.01
59_L 199_H 0.77 0.01
127_K 139_L 0.77 0.01
99_S 326_K 0.77 0.01
160_R 218_E 0.76 0.01
218_L 413_F 0.76 0.01
99_S 307_V 0.76 0.01
185_T 314_T 0.76 0.01
173_R 161_V 0.76 0.01
100_G 23_L 0.75 0.01
119_P 33_D 0.75 0.01
184_V 389_P 0.74 0.01
13_E 369_E 0.74 0.01
3_I 161_V 0.74 0.01
62_H 122_D 0.74 0.01
187_G 100_K 0.74 0.01
137_G 193_Q 0.74 0.01
95_L 105_K 0.73 0.01
95_L 316_I 0.73 0.01
32_I 49_I 0.73 0.01
99_S 195_I 0.73 0.01
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

Page generated in 0.0084 seconds.