May 4, 2021 - We are working on upgrading the webserver, some pages may not work.
OPENSEQ.org

FOLD - YBCJ
UniProt:
Length: 358
Sequences: 708
Seq/Len: 2.03
I_Prob: 0.00
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
136_P 35_A 0.91 0.00
150_L 63_G 0.88 0.00
221_I 22_G 0.88 0.00
63_F 59_V 0.87 0.00
207_I 8_K 0.82 0.00
238_G 30_A 0.81 0.00
12_A 29_Q 0.80 0.00
236_E 44_A 0.79 0.00
158_F 34_I 0.76 0.00
31_L 16_D 0.75 0.00
266_M 17_L 0.73 0.00
6_I 16_D 0.72 0.00
208_V 58_T 0.69 0.00
93_D 51_C 0.69 0.00
164_V 26_S 0.68 0.00
178_E 15_C 0.67 0.00
219_D 61_F 0.67 0.00
177_M 34_I 0.67 0.00
250_A 59_V 0.67 0.00
1_M 50_R 0.66 0.00
268_V 68_V 0.66 0.00
189_T 21_E 0.66 0.00
164_V 30_A 0.65 0.00
71_P 65_S 0.65 0.00
139_R 46_E 0.64 0.00
265_P 15_C 0.63 0.00
67_S 26_S 0.63 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

Page generated in 0.0297 seconds.