May 4, 2021 - We are working on upgrading the webserver, some pages may not work.
OPENSEQ.org
DAPB - LSPA
UniProt:
Length: 437
Sequences: 1520
Seq/Len: 3.65
I_Prob: 0.03
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
143_A 59_S 1.06 0.03
34_G 116_L 0.90 0.02
143_A 146_V 0.69 0.01
235_H 137_F 0.68 0.01
139_L 69_R 0.68 0.01
85_T 47_N 0.67 0.01
6_I 38_D 0.67 0.01
144_A 143_A 0.67 0.01
64_S 109_L 0.67 0.01
134_N 116_L 0.66 0.01
267_V 71_F 0.66 0.01
6_I 79_I 0.66 0.01
80_T 152_V 0.66 0.01
109_A 92_A 0.65 0.01
148_G 59_S 0.65 0.01
23_Q 156_F 0.64 0.01
57_K 139_L 0.64 0.01
52_L 104_I 0.64 0.01
179_A 70_W 0.63 0.01
173_A 76_A 0.63 0.01
222_A 103_L 0.63 0.01
255_S 18_V 0.62 0.01
76_F 105_I 0.62 0.01
10_I 118_H 0.62 0.01
10_I 102_A 0.61 0.01
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
Page generated in 0.0127 seconds.