May 4, 2021 - We are working on upgrading the webserver, some pages may not work.
OPENSEQ.org

COAD - PYRE
UniProt:
Length: 372
Sequences: 1446
Seq/Len: 3.92
I_Prob: 0.01
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
72_D 140_I 0.95 0.01
86_L 13_L 0.93 0.01
31_H 141_Q 0.73 0.01
108_H 141_Q 0.70 0.00
78_A 140_I 0.70 0.00
59_T 78_A 0.70 0.00
133_K 37_A 0.70 0.00
31_H 115_A 0.68 0.00
22_V 187_L 0.68 0.00
58_A 137_M 0.68 0.00
37_A 35_F 0.67 0.00
55_A 206_A 0.66 0.00
142_V 8_F 0.65 0.00
156_A 146_T 0.65 0.00
60_A 117_Q 0.64 0.00
10_T 154_L 0.64 0.00
37_A 70_P 0.63 0.00
86_L 81_T 0.63 0.00
56_Q 146_T 0.62 0.00
23_T 63_E 0.62 0.00
80_N 51_R 0.62 0.00
36_I 136_S 0.62 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

Page generated in 0.0108 seconds.