May 4, 2021 - We are working on upgrading the webserver, some pages may not work.
OPENSEQ.org

CDSA - UPPS
UniProt:
Length: 538
Sequences: 1819
Seq/Len: 3.61
I_Prob: 0.01
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
162_W 78_P 0.95 0.01
43_W 72_S 0.94 0.01
266_S 104_N 0.88 0.01
227_A 243_F 0.84 0.01
6_L 144_N 0.81 0.00
231_S 141_I 0.81 0.00
268_T 33_K 0.78 0.00
181_A 92_A 0.78 0.00
30_I 223_D 0.76 0.00
189_T 100_L 0.75 0.00
240_M 196_G 0.74 0.00
156_Y 61_G 0.74 0.00
181_A 144_N 0.72 0.00
162_W 232_A 0.71 0.00
123_F 240_E 0.71 0.00
93_L 233_L 0.71 0.00
237_T 209_I 0.71 0.00
126_L 21_V 0.70 0.00
190_W 146_G 0.69 0.00
240_M 92_A 0.69 0.00
9_A 97_V 0.68 0.00
270_A 110_I 0.68 0.00
224_S 116_F 0.66 0.00
106_Y 22_A 0.66 0.00
105_F 124_I 0.65 0.00
224_S 174_E 0.65 0.00
37_M 205_L 0.65 0.00
104_L 21_V 0.65 0.00
36_C 218_D 0.64 0.00
135_M 33_K 0.64 0.00
232_V 92_A 0.64 0.00
191_Q 96_E 0.62 0.00
120_R 189_V 0.61 0.00
210_W 118_S 0.61 0.00
266_S 89_F 0.61 0.00
198_A 240_E 0.61 0.00
123_F 219_V 0.61 0.00
18_A 129_A 0.60 0.00
24_P 139_L 0.60 0.00
136_L 83_S 0.60 0.00
253_L 51_R 0.60 0.00
171_F 51_R 0.60 0.00
264_I 72_S 0.59 0.00
251_G 214_L 0.59 0.00
202_V 121_Q 0.59 0.00
272_P 67_L 0.59 0.00
98_V 226_E 0.59 0.00
125_V 219_V 0.58 0.00
166_S 40_A 0.58 0.00
250_S 105_V 0.58 0.00
12_L 195_T 0.58 0.00
189_T 110_I 0.58 0.00
100_L 236_F 0.58 0.00
240_M 68_Y 0.57 0.00
38_L 133_G 0.57 0.00
68_L 138_T 0.57 0.00
199_T 76_N 0.57 0.00
39_A 215_Y 0.56 0.00
181_A 69_A 0.56 0.00
18_A 98_K 0.56 0.00
218_V 147_G 0.56 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

Page generated in 0.015 seconds.