May 4, 2021 - We are working on upgrading the webserver, some pages may not work.
OPENSEQ.org

ATPF - ATPG
UniProt:
Length: 443
Sequences: 1568
Seq/Len: 3.54
I_Prob: 0.01
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
44_L 81_V 0.98 0.01
21_C 30_S 0.97 0.01
20_F 90_G 0.93 0.01
146_S 160_Y 0.90 0.01
77_E 251_T 0.90 0.01
108_E 12_A 0.82 0.01
79_A 80_V 0.82 0.01
156_L 256_S 0.82 0.01
62_T 53_I 0.80 0.01
152_L 277_L 0.80 0.01
109_I 160_Y 0.79 0.01
151_K 53_I 0.79 0.01
109_I 142_D 0.76 0.01
131_G 222_R 0.75 0.01
114_K 165_L 0.75 0.01
117_R 217_D 0.74 0.01
149_V 153_V 0.74 0.01
6_T 49_M 0.74 0.01
155_E 68_L 0.74 0.01
156_L 120_S 0.74 0.01
117_R 79_L 0.74 0.01
96_Q 171_V 0.73 0.01
18_V 229_Y 0.72 0.00
83_R 224_V 0.71 0.00
13_A 15_Q 0.71 0.00
16_L 202_K 0.71 0.00
128_A 258_I 0.70 0.00
58_K 4_A 0.70 0.00
12_I 260_E 0.70 0.00
76_I 78_Y 0.70 0.00
15_V 93_I 0.69 0.00
107_A 95_L 0.69 0.00
49_R 152_P 0.69 0.00
42_D 75_R 0.69 0.00
72_A 279_E 0.69 0.00
63_D 88_C 0.69 0.00
16_L 104_K 0.68 0.00
68_A 240_Q 0.68 0.00
32_A 39_M 0.68 0.00
105_A 146_L 0.68 0.00
52_K 130_G 0.68 0.00
10_Q 22_K 0.68 0.00
43_G 179_M 0.67 0.00
139_S 277_L 0.67 0.00
149_V 55_H 0.67 0.00
155_E 242_A 0.67 0.00
72_A 220_L 0.66 0.00
155_E 90_G 0.66 0.00
94_A 215_L 0.66 0.00
40_I 130_G 0.66 0.00
23_K 278_T 0.66 0.00
63_D 117_M 0.66 0.00
62_T 147_S 0.66 0.00
34_E 126_F 0.66 0.00
108_E 72_D 0.66 0.00
55_D 168_L 0.65 0.00
38_K 152_P 0.65 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

Page generated in 0.0127 seconds.