May 4, 2021 - We are working on upgrading the webserver, some pages may not work.
OPENSEQ.org

ATPE - ATPG
UniProt:
Length: 426
Sequences: 1290
Seq/Len: 3.04
I_Prob: 0.56
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
43_L 56_L 1.41 0.56
9_V 215_L 1.28 0.45
40_A 207_L 1.22 0.39
75_G 197_D 1.14 0.31
84_A 144_P 1.01 0.22
89_D 242_A 1.00 0.21
69_I 221_R 0.99 0.20
129_L 232_V 0.99 0.20
71_E 244_M 0.98 0.19
23_K 16_N 0.96 0.18
95_A 189_L 0.96 0.18
12_A 6_E 0.95 0.17
64_Y 268_A 0.94 0.17
131_V 172_S 0.94 0.17
53_I 12_A 0.93 0.16
71_E 26_M 0.91 0.15
22_E 105_T 0.91 0.15
49_G 5_K 0.89 0.14
32_E 224_V 0.88 0.14
129_L 100_L 0.87 0.13
51_I 74_K 0.85 0.12
45_A 215_L 0.84 0.12
27_T 128_S 0.84 0.12
60_E 249_A 0.84 0.11
81_A 165_L 0.83 0.11
67_G 222_R 0.83 0.11
48_P 30_S 0.83 0.11
43_L 277_L 0.83 0.11
79_V 56_L 0.81 0.10
17_F 177_N 0.81 0.10
71_E 206_Y 0.81 0.10
41_P 206_Y 0.81 0.10
129_L 53_I 0.80 0.10
24_I 22_K 0.79 0.10
26_V 212_P 0.79 0.09
46_I 115_L 0.79 0.09
28_G 209_E 0.78 0.09
35_I 95_L 0.78 0.09
28_G 82_S 0.78 0.09
132_I 260_E 0.77 0.09
59_H 160_Y 0.77 0.09
30_E 209_E 0.77 0.09
50_M 170_I 0.77 0.08
71_E 48_T 0.76 0.08
10_V 231_G 0.76 0.08
34_G 5_K 0.76 0.08
58_G 145_S 0.76 0.08
133_E 242_A 0.75 0.08
96_M 97_K 0.75 0.08
27_T 78_Y 0.74 0.07
69_I 146_L 0.74 0.07
23_K 242_A 0.74 0.07
69_I 275_Q 0.74 0.07
83_T 224_V 0.73 0.07
92_E 229_Y 0.73 0.07
100_R 145_S 0.73 0.07
80_L 29_A 0.72 0.07
15_Q 285_A 0.72 0.07
117_Q 170_I 0.72 0.07
12_A 30_S 0.72 0.07
86_R 179_M 0.72 0.07
136_K 215_L 0.71 0.07
1_M 60_N 0.71 0.07
6_H 229_Y 0.71 0.06
24_I 2_A 0.71 0.06
103_E 80_V 0.71 0.06
5_Y 46_A 0.70 0.06
10_V 206_Y 0.70 0.06
109_S 249_A 0.70 0.06
90_L 53_I 0.69 0.06
49_G 92_N 0.69 0.06
100_R 197_D 0.69 0.06
45_A 228_V 0.69 0.06
99_K 16_N 0.69 0.06
82_D 178_T 0.69 0.06
36_Y 277_L 0.68 0.06
44_T 60_N 0.68 0.06
99_K 160_Y 0.68 0.06
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

Page generated in 0.0387 seconds.