May 4, 2021 - We are working on upgrading the webserver, some pages may not work.
OPENSEQ.org

APAG - DYR
UniProt:
Length: 284
Sequences: 615
Seq/Len: 2.20
I_Prob: 0.03
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
33_V 80_E 1.20 0.03
68_V 70_D 1.15 0.03
7_V 91_I 1.10 0.02
81_Q 138_S 1.04 0.02
55_G 26_A 0.96 0.01
29_F 18_N 0.95 0.01
113_I 92_M 0.93 0.01
26_R 115_I 0.93 0.01
46_L 104_L 0.92 0.01
28_V 155_I 0.90 0.01
78_E 18_N 0.90 0.01
21_S 102_Q 0.89 0.01
17_E 123_T 0.87 0.01
81_Q 103_F 0.85 0.01
18_A 70_D 0.85 0.01
29_F 12_R 0.84 0.01
101_M 111_Y 0.83 0.01
53_T 21_P 0.82 0.01
6_R 156_L 0.81 0.01
15_Y 105_P 0.81 0.01
12_Q 76_K 0.79 0.01
83_T 133_W 0.77 0.01
103_D 2_I 0.77 0.01
33_V 108_Q 0.76 0.01
87_I 6_A 0.76 0.01
21_S 25_P 0.75 0.01
29_F 147_N 0.75 0.01
114_P 12_R 0.75 0.01
30_A 2_I 0.75 0.01
55_G 133_W 0.74 0.01
60_T 97_G 0.74 0.01
15_Y 13_V 0.74 0.01
34_T 62_L 0.73 0.01
115_V 115_I 0.72 0.01
99_Y 90_E 0.72 0.01
80_Y 130_P 0.72 0.01
57_G 6_A 0.72 0.01
71_Q 154_E 0.71 0.01
40_R 139_E 0.70 0.01
7_V 64_S 0.69 0.01
121_P 47_W 0.69 0.01
108_P 70_D 0.69 0.01
57_G 40_V 0.69 0.01
75_A 151_Y 0.68 0.01
11_V 60_I 0.68 0.01
74_I 130_P 0.68 0.01
117_R 38_K 0.67 0.01
44_Q 72_V 0.67 0.01
85_G 9_A 0.67 0.01
57_G 14_I 0.67 0.01
8_C 5_I 0.67 0.01
53_T 110_L 0.67 0.01
114_P 65_Q 0.66 0.01
17_E 110_L 0.66 0.01
9_I 41_I 0.66 0.01
85_G 81_A 0.66 0.01
55_G 9_A 0.66 0.01
53_T 48_E 0.66 0.01
65_E 5_I 0.66 0.01
110_S 93_V 0.65 0.01
7_V 129_E 0.65 0.01
63_Q 112_L 0.65 0.01
113_I 28_L 0.65 0.01
124_I 17_E 0.65 0.01
46_L 148_S 0.65 0.01
109_F 126_P 0.65 0.01
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

Page generated in 0.0061 seconds.