May 4, 2021 - We are working on upgrading the webserver, some pages may not work.
OPENSEQ.org

AMPE - COAE
UniProt:
Length: 490
Sequences: 1111
Seq/Len: 2.39
I_Prob: 0.00
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
9_V 156_L 0.96 0.00
153_V 23_A 0.92 0.00
210_L 148_T 0.87 0.00
177_R 25_L 0.85 0.00
148_L 155_I 0.79 0.00
131_E 132_V 0.78 0.00
130_R 46_A 0.77 0.00
168_L 93_Q 0.74 0.00
229_H 112_V 0.73 0.00
269_V 29_V 0.72 0.00
191_A 78_P 0.71 0.00
99_S 98_H 0.71 0.00
187_S 22_F 0.70 0.00
215_E 66_Q 0.69 0.00
7_L 148_T 0.68 0.00
228_F 111_V 0.67 0.00
255_T 4_I 0.67 0.00
132_L 35_I 0.67 0.00
118_G 91_L 0.67 0.00
260_V 85_N 0.66 0.00
254_E 186_V 0.66 0.00
266_T 172_V 0.66 0.00
61_L 98_H 0.66 0.00
149_F 172_V 0.66 0.00
203_L 123_K 0.65 0.00
9_V 12_G 0.65 0.00
72_L 105_S 0.65 0.00
130_R 114_L 0.64 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

Page generated in 0.1517 seconds.