May 4, 2021 - We are working on upgrading the webserver, some pages may not work.
OPENSEQ.org

IOJAP - LIPB
UniProt:
Length: 318
Sequences: 1070
Seq/Len: 3.48
I_Prob: 0.21
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
90_M 130_Y 1.23 0.21
37_M 39_W 1.18 0.18
75_A 137_C 1.04 0.12
40_C 137_C 1.03 0.12
22_I 121_H 0.93 0.08
47_H 125_D 0.91 0.08
93_E 42_E 0.86 0.06
46_R 126_A 0.86 0.06
48_V 142_R 0.85 0.06
68_G 97_G 0.83 0.06
36_C 77_Y 0.80 0.05
19_G 203_L 0.80 0.05
87_V 131_V 0.79 0.05
27_V 36_D 0.77 0.04
78_I 138_S 0.77 0.04
102_K 41_V 0.76 0.04
31_S 142_R 0.76 0.04
90_M 147_C 0.76 0.04
41_T 66_V 0.76 0.04
88_H 138_S 0.75 0.04
102_K 42_E 0.75 0.04
88_H 77_Y 0.74 0.04
78_I 69_S 0.73 0.04
75_A 15_P 0.73 0.04
68_G 139_L 0.72 0.04
86_I 13_L 0.71 0.04
89_V 129_V 0.71 0.04
23_I 185_E 0.71 0.04
40_C 18_P 0.71 0.04
18_K 74_Q 0.69 0.03
50_S 185_E 0.69 0.03
47_H 59_L 0.69 0.03
37_M 58_I 0.68 0.03
101_E 204_N 0.68 0.03
46_R 67_I 0.68 0.03
38_I 202_L 0.68 0.03
86_I 10_Q 0.67 0.03
53_D 200_L 0.67 0.03
39_I 17_E 0.67 0.03
48_V 98_V 0.67 0.03
90_M 51_Q 0.67 0.03
41_T 9_R 0.67 0.03
35_D 148_S 0.67 0.03
94_S 122_P 0.66 0.03
53_D 129_V 0.66 0.03
89_V 148_S 0.65 0.03
41_T 69_S 0.65 0.03
102_K 49_Q 0.65 0.03
50_S 161_S 0.64 0.03
93_E 133_E 0.64 0.03
14_I 99_R 0.64 0.03
4_K 191_I 0.63 0.02
94_S 94_R 0.63 0.02
51_I 149_F 0.63 0.02
49_M 38_I 0.63 0.02
39_I 13_L 0.63 0.02
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

Page generated in 0.0094 seconds.