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OPENSEQ.org

RSMI - YRAN
UniProt: P67087 - P45465
Length: 417
Sequences: 476
Seq/Len: 1.21
I_Prob: 0.00

RSMI - Ribosomal RNA small subunit methyltransferase I
Paralog alert: 0.02 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: RSMI
YRAN - UPF0102 protein YraN
Paralog alert: 0.01 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: YRAN
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
147_A 66_R 1.21 0.00
167_I 69_R 1.13 0.00
205_I 76_A 1.04 0.00
21_I 54_M 1.02 0.00
111_E 53_I 0.99 0.00
86_N 87_K 0.98 0.00
196_R 92_A 0.98 0.00
54_Q 53_I 0.97 0.00
219_E 39_I 0.96 0.00
28_T 103_F 0.95 0.00
111_E 59_T 0.93 0.00
103_Y 67_Y 0.91 0.00
253_L 122_W 0.91 0.00
92_D 31_L 0.90 0.00
87_I 43_V 0.89 0.00
89_L 68_R 0.89 0.00
281_A 80_V 0.88 0.00
92_D 68_R 0.87 0.00
125_A 112_V 0.86 0.00
163_P 32_E 0.86 0.00
13_Q 50_I 0.85 0.00
43_A 33_G 0.85 0.00
99_N 60_T 0.85 0.00
232_V 66_R 0.84 0.00
110_R 88_L 0.84 0.00
266_A 73_Y 0.83 0.00
173_H 122_W 0.82 0.00
16_I 106_V 0.82 0.00
132_A 85_Q 0.81 0.00
36_Q 33_G 0.81 0.00
141_Y 60_T 0.81 0.00
99_N 117_G 0.81 0.00
61_R 59_T 0.81 0.00
112_A 52_L 0.81 0.00
63_F 57_G 0.81 0.00
92_D 27_A 0.80 0.00
169_Y 36_L 0.80 0.00
51_L 83_S 0.80 0.00
89_L 57_G 0.79 0.00
232_V 96_L 0.79 0.00
263_A 110_F 0.78 0.00
61_R 112_V 0.78 0.00
266_A 127_F 0.78 0.00
231_I 113_V 0.78 0.00
83_E 53_I 0.78 0.00
212_E 77_A 0.78 0.00
217_V 66_R 0.77 0.00
280_Y 63_V 0.77 0.00
163_P 80_V 0.77 0.00
76_T 83_S 0.77 0.00
99_N 91_T 0.77 0.00
89_L 31_L 0.77 0.00
82_Q 41_A 0.76 0.00
262_A 76_A 0.76 0.00
99_N 43_V 0.76 0.00
279_K 85_Q 0.76 0.00
259_L 67_Y 0.75 0.00
169_Y 95_W 0.75 0.00
228_M 56_E 0.75 0.00
136_S 108_C 0.75 0.00
131_A 52_L 0.74 0.00
210_V 113_V 0.74 0.00
38_V 113_V 0.74 0.00
216_W 66_R 0.74 0.00
270_H 79_S 0.74 0.00
148_K 68_R 0.74 0.00
185_V 76_A 0.74 0.00
173_H 66_R 0.74 0.00
61_R 89_L 0.74 0.00
149_S 124_K 0.73 0.00
124_A 45_E 0.73 0.00
238_Q 70_S 0.73 0.00
82_Q 85_Q 0.73 0.00
282_L 40_A 0.73 0.00
118_P 84_K 0.73 0.00
21_I 50_I 0.73 0.00
213_L 17_K 0.73 0.00
225_K 125_D 0.73 0.00
43_A 84_K 0.72 0.00
88_A 63_V 0.72 0.00
118_P 74_G 0.72 0.00
85_Q 53_I 0.71 0.00
265_L 108_C 0.71 0.00
266_A 78_A 0.71 0.00
263_A 114_A 0.71 0.00
251_A 88_L 0.71 0.00
250_L 114_A 0.70 0.00
70_E 42_N 0.70 0.00
199_T 52_L 0.70 0.00
148_K 31_L 0.70 0.00
49_T 121_E 0.70 0.00
225_K 76_A 0.70 0.00
21_I 48_G 0.70 0.00
274_K 81_T 0.69 0.00
249_T 60_T 0.69 0.00
107_R 50_I 0.69 0.00
211_G 69_R 0.69 0.00
125_A 96_L 0.69 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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