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OPENSEQ.org

RIBD - RISB
UniProt: P25539 - P61714
Length: 523
Sequences: 786
Seq/Len: 1.54
I_Prob: 0.00

RIBD - Riboflavin biosynthesis protein RibD
Paralog alert: 0.02 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: RIBD
RISB - 6,7-dimethyl-8-ribityllumazine synthase
Paralog alert: 0.05 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: RISB
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
43_H 114_F 1.16 0.00
322_A 117_L 0.89 0.00
320_Y 105_A 0.89 0.00
315_D 90_F 0.85 0.00
94_A 14_R 0.83 0.00
284_L 20_A 0.82 0.00
305_A 34_A 0.80 0.00
195_A 76_V 0.79 0.00
107_V 17_I 0.78 0.00
292_Q 72_K 0.77 0.00
245_V 148_I 0.76 0.00
190_I 70_T 0.74 0.00
93_V 116_V 0.74 0.00
94_A 70_T 0.73 0.00
230_I 3_I 0.72 0.00
161_T 63_A 0.70 0.00
315_D 91_E 0.69 0.00
296_I 32_E 0.68 0.00
173_S 148_I 0.68 0.00
108_A 72_K 0.67 0.00
364_L 119_T 0.67 0.00
150_Q 117_L 0.67 0.00
304_L 106_Q 0.67 0.00
161_T 14_R 0.67 0.00
309_L 123_E 0.67 0.00
90_A 18_T 0.67 0.00
95_R 14_R 0.67 0.00
296_I 4_I 0.66 0.00
201_D 12_D 0.66 0.00
80_R 151_L 0.66 0.00
82_P 1_M 0.66 0.00
128_M 35_I 0.66 0.00
254_A 98_S 0.66 0.00
29_C 121_S 0.66 0.00
14_A 146_E 0.65 0.00
17_G 112_V 0.65 0.00
201_D 8_V 0.65 0.00
46_A 107_D 0.64 0.00
31_I 116_V 0.64 0.00
172_T 7_N 0.64 0.00
312_G 4_I 0.63 0.00
164_A 20_A 0.63 0.00
298_V 22_F 0.62 0.00
171_I 120_E 0.62 0.00
131_A 121_S 0.62 0.00
277_G 117_L 0.62 0.00
43_H 58_Y 0.62 0.00
229_R 94_A 0.62 0.00
171_I 121_S 0.62 0.00
156_S 144_A 0.62 0.00
238_V 91_E 0.62 0.00
358_P 46_D 0.62 0.00
294_N 147_M 0.62 0.00
244_I 77_I 0.61 0.00
259_D 72_K 0.61 0.00
320_Y 143_T 0.61 0.00
186_Q 150_V 0.61 0.00
108_A 5_E 0.61 0.00
91_A 104_V 0.61 0.00
26_N 27_N 0.60 0.00
181_Q 121_S 0.60 0.00
308_L 98_S 0.60 0.00
315_D 140_A 0.60 0.00
138_F 62_L 0.60 0.00
303_T 90_F 0.60 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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