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OPENSEQ.org

MNME - RSMG
UniProt: P25522 - P0A6U5
Length: 661
Sequences: 565
Seq/Len: 0.86
I_Prob: 0.00

MNME - tRNA modification GTPase MnmE
Paralog alert: 0.01 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: MNME
RSMG - Ribosomal RNA small subunit methyltransferase G
Paralog alert: 0.01 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: RSMG
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
22_L 21_K 1.34 0.00
20_G 5_L 1.33 0.00
13_P 108_V 1.30 0.00
163_L 126_E 1.29 0.00
446_I 74_T 1.21 0.00
86_G 142_A 1.21 0.00
302_M 42_S 1.20 0.00
33_A 72_V 1.19 0.00
348_E 7_L 1.17 0.00
135_A 202_I 1.17 0.00
248_A 152_H 1.16 0.00
63_I 42_S 1.15 0.00
442_L 34_W 1.11 0.00
395_A 199_L 1.10 0.00
392_H 33_K 1.10 0.00
221_I 76_P 1.10 0.00
237_A 34_W 1.09 0.00
442_L 49_M 1.09 0.00
35_T 156_G 1.08 0.00
257_E 82_P 1.05 0.00
129_I 44_R 1.05 0.00
374_Q 200_V 1.05 0.00
20_G 191_P 1.04 0.00
410_L 83_L 1.03 0.00
213_L 27_Y 1.02 0.00
220_V 176_L 1.02 0.00
22_L 132_P 1.01 0.00
135_A 199_L 1.01 0.00
278_S 81_I 1.00 0.00
300_L 136_V 1.00 0.00
137_S 119_P 1.00 0.00
414_W 186_V 0.99 0.00
56_G 69_F 0.98 0.00
221_I 37_A 0.98 0.00
18_G 95_L 0.97 0.00
255_L 166_G 0.97 0.00
304_D 55_L 0.97 0.00
240_E 60_V 0.97 0.00
89_I 133_F 0.96 0.00
103_L 58_I 0.96 0.00
281_V 78_L 0.95 0.00
227_A 37_A 0.95 0.00
248_A 81_I 0.95 0.00
13_P 55_L 0.95 0.00
268_I 70_I 0.95 0.00
36_V 152_H 0.95 0.00
227_A 72_V 0.94 0.00
324_L 106_R 0.94 0.00
433_I 25_I 0.94 0.00
412_G 8_L 0.93 0.00
169_Y 138_S 0.93 0.00
422_E 153_H 0.93 0.00
156_V 49_M 0.93 0.00
19_V 173_I 0.93 0.00
424_R 166_G 0.93 0.00
178_D 117_I 0.93 0.00
227_A 120_V 0.93 0.00
334_R 76_P 0.92 0.00
423_L 112_L 0.92 0.00
245_T 100_K 0.92 0.00
57_S 102_V 0.92 0.00
299_V 133_F 0.91 0.00
20_G 63_Y 0.91 0.00
162_A 120_V 0.91 0.00
396_L 138_S 0.91 0.00
210_G 54_I 0.91 0.00
199_D 14_I 0.90 0.00
362_G 185_V 0.90 0.00
176_F 101_R 0.90 0.00
71_N 70_I 0.89 0.00
176_F 166_G 0.89 0.00
392_H 101_R 0.89 0.00
197_I 72_V 0.89 0.00
124_A 20_Q 0.88 0.00
181_I 9_L 0.88 0.00
112_S 98_L 0.88 0.00
8_V 59_V 0.88 0.00
29_A 159_G 0.88 0.00
212_L 173_I 0.88 0.00
158_H 115_E 0.88 0.00
191_A 81_I 0.88 0.00
190_E 175_L 0.88 0.00
388_A 107_Q 0.87 0.00
121_L 119_P 0.87 0.00
174_I 163_A 0.86 0.00
221_I 141_F 0.86 0.00
90_L 200_V 0.86 0.00
124_A 27_Y 0.86 0.00
278_S 60_V 0.85 0.00
94_L 48_E 0.85 0.00
386_F 96_D 0.85 0.00
424_R 163_A 0.85 0.00
388_A 163_A 0.84 0.00
245_T 98_L 0.84 0.00
157_N 27_Y 0.84 0.00
164_T 82_P 0.84 0.00
354_L 133_F 0.84 0.00
257_E 97_S 0.84 0.00
231_S 64_L 0.84 0.00
286_I 150_W 0.83 0.00
433_I 60_V 0.83 0.00
174_I 37_A 0.83 0.00
166_L 112_L 0.83 0.00
428_Q 100_K 0.83 0.00
88_V 166_G 0.82 0.00
18_G 70_I 0.82 0.00
121_L 102_V 0.82 0.00
283_R 91_H 0.82 0.00
382_M 27_Y 0.82 0.00
328_L 159_G 0.82 0.00
302_M 173_I 0.82 0.00
335_N 83_L 0.81 0.00
146_N 102_V 0.81 0.00
218_K 101_R 0.81 0.00
358_S 53_H 0.81 0.00
289_A 74_T 0.81 0.00
36_V 113_K 0.81 0.00
214_R 166_G 0.81 0.00
423_L 114_L 0.81 0.00
392_H 164_L 0.80 0.00
124_A 35_N 0.80 0.00
140_A 197_R 0.80 0.00
294_E 4_K 0.80 0.00
227_A 99_G 0.80 0.00
444_G 136_V 0.80 0.00
389_R 101_R 0.80 0.00
195_D 171_D 0.80 0.00
345_G 162_Y 0.80 0.00
167_R 98_L 0.80 0.00
130_A 96_D 0.79 0.00
419_L 37_A 0.79 0.00
135_A 201_V 0.79 0.00
449_S 99_G 0.79 0.00
240_E 157_E 0.79 0.00
60_D 195_G 0.79 0.00
105_I 199_L 0.79 0.00
246_D 81_I 0.79 0.00
108_P 154_L 0.79 0.00
49_L 78_L 0.79 0.00
237_A 9_L 0.78 0.00
177_P 45_D 0.78 0.00
268_I 143_S 0.78 0.00
438_T 138_S 0.78 0.00
18_G 154_L 0.78 0.00
408_A 70_I 0.78 0.00
294_E 162_Y 0.78 0.00
294_E 92_F 0.78 0.00
254_V 32_H 0.78 0.00
303_V 180_Y 0.78 0.00
293_I 163_A 0.78 0.00
159_L 13_G 0.78 0.00
170_V 164_L 0.78 0.00
142_R 168_M 0.78 0.00
392_H 54_I 0.78 0.00
446_I 101_R 0.78 0.00
288_R 92_F 0.78 0.00
362_G 14_I 0.78 0.00
135_A 67_E 0.77 0.00
393_L 110_H 0.77 0.00
362_G 3_N 0.77 0.00
268_I 78_L 0.77 0.00
95_K 106_R 0.77 0.00
171_E 197_R 0.77 0.00
265_P 146_D 0.77 0.00
222_A 136_V 0.77 0.00
339_I 127_F 0.77 0.00
443_L 202_I 0.77 0.00
10_Q 43_V 0.76 0.00
302_M 44_R 0.76 0.00
346_M 7_L 0.76 0.00
412_G 203_K 0.76 0.00
70_P 100_K 0.76 0.00
283_R 120_V 0.76 0.00
348_E 189_Q 0.76 0.00
268_I 95_L 0.76 0.00
103_L 16_L 0.76 0.00
418_L 126_E 0.76 0.00
248_A 101_R 0.76 0.00
266_L 104_F 0.76 0.00
73_F 127_F 0.76 0.00
283_R 145_N 0.76 0.00
276_E 72_V 0.76 0.00
180_E 60_V 0.76 0.00
10_Q 76_P 0.76 0.00
174_I 136_V 0.75 0.00
117_L 134_D 0.75 0.00
388_A 95_L 0.75 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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