| UniProt: | P23908 - P32677 | ||
| Length: | 666 | ||
| Sequences: | 903 | ||
| Seq/Len: | 1.47 | ||
| I_Prob: | 0.00 |
| ARGE - Acetylornithine deacetylase
Paralog alert: 0.89 [within 20: 0.18] - ratio of genomes with paralogs Cluster includes: ABGA ABGB ALLC ARGE DAPE PEPT YGEY |
YIJO - Uncharacterized HTH-type transcriptional regulator YijO Paralog alert: 0.78 [within 20: 0.20] - ratio of genomes with paralogs Cluster includes: ADIY APPY ARAC CHBR ENVY EUTR FEAR GADW GADX MARA MELR RHAR RHAS SOXS YBCM YDEO YDIP YEAM YIDL YIJO YKGD YPDC YQHC |
Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
| 1q7l | AC:BD | Contact Map |
| i | j | Scaled Score | I_Prob |
| 189_I | 57_G | 0.92 | 0.00 |
| 294_T | 198_S | 0.90 | 0.00 |
| 346_L | 229_L | 0.83 | 0.00 |
| 123_A | 252_F | 0.81 | 0.00 |
| 244_I | 134_M | 0.78 | 0.00 |
| 132_L | 67_Y | 0.78 | 0.00 |
| 239_L | 196_Y | 0.77 | 0.00 |
| 45_D | 91_K | 0.76 | 0.00 |
| 269_M | 132_M | 0.75 | 0.00 |
| 244_I | 92_Q | 0.74 | 0.00 |
| 351_I | 237_V | 0.72 | 0.00 |
| 163_D | 186_L | 0.71 | 0.00 |
| 79_G | 55_G | 0.71 | 0.00 |
| 13_R | 263_S | 0.71 | 0.00 |
| 318_E | 146_V | 0.70 | 0.00 |
| 318_E | 240_V | 0.70 | 0.00 |
| 216_I | 132_M | 0.70 | 0.00 |
| 36_I | 150_L | 0.70 | 0.00 |
| 313_L | 150_L | 0.70 | 0.00 |
| 67_S | 178_I | 0.69 | 0.00 |
| 26_E | 43_L | 0.69 | 0.00 |
| 290_P | 63_G | 0.69 | 0.00 |
Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)
Text file of predictions (includes both intra and inter preds)