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OPENSEQ.org

RL30 - RPOA
UniProt: P0AG51 - P0A7Z4
Length: 388
Sequences: 615
Seq/Len: 1.61
I_Prob: 0.12

RL30 - 50S ribosomal protein L30
Paralog alert: 0.00 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: RL30
RPOA - DNA-directed RNA polymerase subunit alpha
Paralog alert: 0.02 [within 20: 0.01] - ratio of genomes with paralogs
Cluster includes: RPOA
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
7_I 64_V 1.44 0.12
16_R 31_L 1.20 0.06
31_R 20_S 1.19 0.06
4_T 132_H 1.06 0.04
12_S 262_L 1.02 0.04
15_G 196_T 1.02 0.04
42_P 61_I 0.97 0.03
57_V 177_Y 0.94 0.03
33_G 80_E 0.94 0.03
55_V 7_E 0.92 0.02
2_A 180_V 0.92 0.02
11_R 168_I 0.92 0.02
16_R 180_V 0.92 0.02
31_R 217_I 0.92 0.02
20_H 257_V 0.91 0.02
53_F 124_V 0.91 0.02
42_P 283_Q 0.91 0.02
56_K 131_C 0.91 0.02
5_I 62_D 0.90 0.02
53_F 58_E 0.89 0.02
19_K 138_A 0.88 0.02
15_G 187_V 0.88 0.02
38_R 297_K 0.87 0.02
21_K 210_T 0.87 0.02
11_R 100_L 0.86 0.02
25_L 202_V 0.85 0.02
43_A 54_C 0.84 0.02
44_I 257_V 0.84 0.02
34_H 60_E 0.84 0.02
35_T 102_L 0.83 0.02
24_L 35_F 0.83 0.02
20_H 314_L 0.82 0.02
6_K 220_A 0.82 0.02
5_I 189_A 0.82 0.02
51_V 105_S 0.81 0.02
53_F 295_L 0.81 0.02
5_I 243_K 0.81 0.02
48_I 252_I 0.80 0.01
21_K 155_A 0.80 0.01
56_K 175_A 0.79 0.01
5_I 91_R 0.78 0.01
10_T 165_E 0.78 0.01
9_Q 317_R 0.78 0.01
39_E 253_L 0.77 0.01
15_G 192_V 0.77 0.01
16_R 314_L 0.76 0.01
22_A 210_T 0.76 0.01
11_R 90_V 0.76 0.01
55_V 26_V 0.76 0.01
58_E 282_V 0.76 0.01
55_V 4_S 0.76 0.01
37_E 105_S 0.76 0.01
36_V 52_P 0.75 0.01
50_A 182_R 0.74 0.01
10_T 139_S 0.74 0.01
57_V 20_S 0.74 0.01
20_H 193_E 0.73 0.01
55_V 185_Y 0.73 0.01
48_I 165_E 0.73 0.01
21_K 309_S 0.73 0.01
18_P 223_I 0.73 0.01
57_V 203_I 0.73 0.01
41_T 54_C 0.72 0.01
45_R 290_L 0.72 0.01
55_V 318_L 0.72 0.01
57_V 132_H 0.72 0.01
44_I 110_V 0.72 0.01
37_E 140_I 0.71 0.01
35_T 42_A 0.71 0.01
25_L 15_D 0.71 0.01
20_H 68_Y 0.71 0.01
49_N 109_P 0.70 0.01
32_I 121_V 0.70 0.01
8_T 10_K 0.70 0.01
53_F 210_T 0.70 0.01
51_V 213_P 0.69 0.01
10_T 35_F 0.69 0.01
38_R 35_F 0.69 0.01
54_M 3_G 0.69 0.01
41_T 311_G 0.69 0.01
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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