May 4, 2021 - We are working on upgrading the webserver, some pages may not work.
OPENSEQ.org

FLIL - FLIP
UniProt: P0ABX8 - P0AC05
Length: 399
Sequences: 268
Seq/Len: 0.72
I_Prob: 0.26

FLIL - Flagellar protein FliL
Paralog alert: 0.01 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: FLIL
FLIP - Flagellar biosynthetic protein FliP
Paralog alert: 0.32 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: FLIP
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
74_Y 213_P 1.89 0.26
143_V 203_V 1.35 0.06
78_T 149_L 1.34 0.06
81_L 201_A 1.29 0.05
152_I 207_L 1.20 0.04
75_I 139_L 1.19 0.04
31_G 171_L 1.18 0.03
31_G 111_D 1.18 0.03
74_Y 216_T 1.17 0.03
30_A 236_V 1.16 0.03
91_S 217_I 1.15 0.03
147_L 53_F 1.15 0.03
118_G 228_L 1.15 0.03
74_Y 76_N 1.13 0.03
96_E 188_T 1.13 0.03
11_K 139_L 1.10 0.03
31_G 120_K 1.10 0.03
66_L 109_Y 1.10 0.03
126_I 238_S 1.09 0.03
31_G 32_P 1.09 0.03
87_R 167_M 1.09 0.03
125_E 206_A 1.08 0.02
152_I 104_V 1.07 0.02
146_V 146_D 1.07 0.02
113_L 240_A 1.07 0.02
112_V 145_A 1.06 0.02
72_V 198_L 1.05 0.02
57_Y 98_F 1.05 0.02
28_A 31_L 1.05 0.02
113_L 224_M 1.04 0.02
62_F 206_A 1.03 0.02
66_L 85_P 1.02 0.02
76_G 207_L 1.02 0.02
37_S 58_L 1.02 0.02
115_T 72_G 1.02 0.02
115_T 224_M 1.02 0.02
152_I 114_Q 1.02 0.02
66_L 123_M 1.01 0.02
74_Y 38_W 1.01 0.02
126_I 85_P 1.01 0.02
41_A 127_L 1.00 0.02
121_N 104_V 0.99 0.02
34_Y 134_L 0.99 0.02
74_Y 207_L 0.98 0.02
23_T 90_L 0.98 0.02
125_E 26_I 0.98 0.02
64_V 243_F 0.97 0.02
147_L 237_G 0.97 0.01
88_S 217_I 0.96 0.01
73_L 144_E 0.96 0.01
149_T 32_P 0.96 0.01
136_A 217_I 0.95 0.01
136_A 109_Y 0.95 0.01
64_V 144_E 0.95 0.01
101_L 181_T 0.95 0.01
66_L 73_L 0.94 0.01
43_D 19_A 0.94 0.01
95_P 224_M 0.94 0.01
97_V 76_N 0.93 0.01
123_I 44_T 0.93 0.01
72_V 223_L 0.93 0.01
101_L 206_A 0.93 0.01
97_V 213_P 0.93 0.01
102_L 106_D 0.93 0.01
26_A 114_Q 0.92 0.01
147_L 190_F 0.92 0.01
22_I 121_I 0.92 0.01
15_W 169_I 0.92 0.01
151_F 56_A 0.92 0.01
85_A 164_A 0.92 0.01
14_L 93_A 0.91 0.01
103_L 106_D 0.91 0.01
10_S 111_D 0.91 0.01
64_V 149_L 0.91 0.01
90_L 147_L 0.91 0.01
104_L 189_I 0.91 0.01
33_S 108_I 0.90 0.01
54_P 180_K 0.90 0.01
111_A 78_L 0.90 0.01
110_A 113_Y 0.90 0.01
110_A 73_L 0.90 0.01
58_A 191_I 0.89 0.01
80_R 54_I 0.89 0.01
44_D 105_I 0.89 0.01
62_F 108_I 0.89 0.01
122_L 175_V 0.89 0.01
153_L 166_P 0.89 0.01
20_V 71_F 0.88 0.01
36_H 82_S 0.88 0.01
44_D 129_K 0.88 0.01
105_F 121_I 0.87 0.01
25_A 152_R 0.87 0.01
152_I 235_L 0.87 0.01
85_A 119_E 0.87 0.01
65_N 26_I 0.87 0.01
57_Y 153_L 0.87 0.01
9_K 113_Y 0.87 0.01
147_L 229_V 0.87 0.01
95_P 195_I 0.87 0.01
147_L 199_V 0.86 0.01
145_D 235_L 0.86 0.01
112_V 60_M 0.86 0.01
129_T 165_V 0.86 0.01
15_W 29_Q 0.86 0.01
93_Y 240_A 0.86 0.01
63_T 82_S 0.86 0.01
82_K 85_P 0.86 0.01
54_P 109_Y 0.86 0.01
115_T 181_T 0.86 0.01
52_P 188_T 0.86 0.01
115_T 38_W 0.86 0.01
110_A 47_F 0.85 0.01
116_E 83_A 0.85 0.01
91_S 213_P 0.85 0.01
143_V 90_L 0.85 0.01
123_I 82_S 0.85 0.01
149_T 36_Q 0.85 0.01
140_K 78_L 0.85 0.01
99_S 53_F 0.85 0.01
109_D 36_Q 0.85 0.01
19_L 104_V 0.85 0.01
60_D 59_L 0.84 0.01
8_K 54_I 0.84 0.01
34_Y 107_K 0.84 0.01
68_D 142_T 0.84 0.01
17_P 200_I 0.84 0.01
31_G 69_I 0.84 0.01
116_E 52_T 0.84 0.01
9_K 27_T 0.84 0.01
145_D 69_I 0.84 0.01
127_K 135_R 0.84 0.01
39_Q 171_L 0.84 0.01
118_G 202_S 0.84 0.01
95_P 43_Q 0.83 0.01
90_L 71_F 0.83 0.01
132_T 191_I 0.83 0.01
107_R 198_L 0.83 0.01
118_G 237_G 0.83 0.01
14_L 125_E 0.83 0.01
130_L 152_R 0.83 0.01
109_D 228_L 0.83 0.01
73_L 229_V 0.83 0.01
83_D 92_L 0.83 0.01
118_G 43_Q 0.83 0.01
138_Q 188_T 0.83 0.01
18_I 100_I 0.83 0.01
76_G 152_R 0.83 0.01
100_R 69_I 0.83 0.01
26_A 132_Q 0.82 0.01
108_Q 125_E 0.82 0.01
93_Y 73_L 0.82 0.01
105_F 44_T 0.82 0.01
72_V 207_L 0.82 0.01
35_W 78_L 0.82 0.01
76_G 188_T 0.82 0.01
133_P 53_F 0.82 0.01
87_R 217_I 0.82 0.01
96_E 85_P 0.82 0.01
83_D 240_A 0.82 0.01
71_R 90_L 0.81 0.01
122_L 173_A 0.81 0.01
98_R 144_E 0.81 0.01
32_Y 134_L 0.81 0.01
59_L 78_L 0.81 0.01
90_L 201_A 0.81 0.01
45_K 157_G 0.81 0.01
29_S 164_A 0.81 0.01
16_I 26_I 0.81 0.01
142_D 206_A 0.81 0.01
139_P 213_P 0.81 0.01
115_T 236_V 0.81 0.01
69_A 119_E 0.81 0.01
147_L 43_Q 0.81 0.01
92_E 236_V 0.81 0.01
64_V 69_I 0.80 0.01
114_A 191_I 0.80 0.01
150_A 92_L 0.80 0.01
104_L 225_L 0.80 0.01
56_F 73_L 0.80 0.01
123_I 243_F 0.80 0.01
79_L 223_L 0.80 0.01
119_K 243_F 0.80 0.01
18_I 113_Y 0.80 0.01
76_G 72_G 0.80 0.01
77_I 150_F 0.80 0.01
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

Page generated in 0.0439 seconds.