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OPENSEQ.org
ATPD - ATPF
UniProt: P0ABA4 - P0ABA0
Length: 333
Sequences: 1143
Seq/Len: 3.43
I_Prob: 0.34
ATPD - ATP synthase subunit delta
Paralog alert: 0.02 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: ATPD 		ATPF - ATP synthase subunit b
Paralog alert: 0.13 [within 20: 0.07] - ratio of genomes with paralogs
Cluster includes: ATPF
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
121_Q 150_D 1.29 0.34
171_L 131_G 1.29 0.33
164_V 135_I 1.24 0.30
124_K 150_D 1.23 0.29
118_S 146_S 1.23 0.29
115_A 145_N 1.20 0.27
143_I 145_N 1.12 0.21
162_G 152_L 1.04 0.17
113_S 15_V 1.04 0.17
167_R 152_L 1.02 0.16
45_A 35_K 1.00 0.15
167_R 135_I 0.95 0.12
99_L 124_V 0.94 0.12
12_A 40_I 0.92 0.11
148_M 137_E 0.92 0.11
47_L 119_E 0.90 0.10
113_S 97_E 0.89 0.10
92_V 69_K 0.89 0.10
109_V 146_S 0.88 0.10
118_S 7_I 0.88 0.10
19_A 68_A 0.86 0.09
140_N 110_E 0.86 0.09
7_V 149_V 0.86 0.09
172_A 126_I 0.86 0.09
149_A 116_A 0.85 0.09
102_V 136_I 0.85 0.09
129_M 48_E 0.85 0.09
105_A 155_E 0.85 0.09
130_E 135_I 0.84 0.08
125_I 153_V 0.82 0.07
14_A 121_R 0.80 0.07
124_K 154_A 0.80 0.07
65_C 83_R 0.80 0.07
82_E 150_D 0.80 0.07
23_Q 143_A 0.79 0.07
115_A 136_I 0.79 0.07
105_A 56_L 0.78 0.07
151_V 16_L 0.78 0.06
156_G 120_L 0.78 0.06
177_S 62_T 0.77 0.06
148_M 124_V 0.77 0.06
79_V 37_Q 0.77 0.06
116_A 16_L 0.76 0.06
60_S 62_T 0.76 0.06
21_E 142_E 0.76 0.06
160_I 106_Q 0.76 0.06
117_L 149_V 0.75 0.06
162_G 149_V 0.74 0.06
149_A 140_V 0.74 0.05
153_I 62_T 0.74 0.05
147_V 140_V 0.73 0.05
72_N 78_Q 0.73 0.05
89_L 85_Q 0.73 0.05
76_L 70_A 0.73 0.05
19_A 112_E 0.73 0.05
81_A 84_S 0.73 0.05
116_A 12_I 0.72 0.05
149_A 148_I 0.72 0.05
35_A 76_I 0.72 0.05
53_A 92_A 0.72 0.05
147_V 10_Q 0.72 0.05
145_K 137_E 0.72 0.05
53_A 135_I 0.72 0.05
28_W 6_T 0.72 0.05
165_R 133_E 0.72 0.05
89_L 149_V 0.72 0.05
160_I 72_A 0.71 0.05
146_S 62_T 0.71 0.05
77_I 48_E 0.71 0.05
153_I 72_A 0.70 0.05
7_V 102_V 0.70 0.05
164_V 127_L 0.70 0.05
115_A 149_V 0.70 0.05
143_I 96_Q 0.70 0.04
145_K 127_L 0.70 0.04
41_N 19_L 0.69 0.04
147_V 67_K 0.69 0.04
89_L 108_E 0.69 0.04
88_A 120_L 0.69 0.04
28_W 57_A 0.68 0.04
173_D 71_E 0.68 0.04
79_V 113_R 0.68 0.04
21_E 45_A 0.68 0.04
44_M 44_L 0.68 0.04
168_L 136_I 0.67 0.04
133_L 31_A 0.67 0.04
143_I 63_D 0.67 0.04
15_A 54_L 0.67 0.04
156_G 89_E 0.67 0.04
158_M 55_D 0.67 0.04
116_A 127_L 0.67 0.04
142_K 93_E 0.67 0.04
167_R 29_L 0.67 0.04
124_K 153_V 0.67 0.04
165_R 123_Q 0.67 0.04
64_V 41_A 0.67 0.04
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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