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OPENSEQ.org

ATPF - RSMG
UniProt: P0ABA0 - P0A6U5
Length: 363
Sequences: 219
Seq/Len: 0.61
I_Prob: 0.00

ATPF - ATP synthase subunit b
Paralog alert: 0.13 [within 20: 0.07] - ratio of genomes with paralogs
Cluster includes: ATPF
RSMG - Ribosomal RNA small subunit methyltransferase G
Paralog alert: 0.01 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: RSMG
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
50_A 99_G 1.43 0.00
56_L 103_R 1.34 0.00
148_I 76_P 1.32 0.00
45_A 193_L 1.28 0.00
50_A 151_C 1.28 0.00
38_K 177_P 1.27 0.00
47_A 68_R 1.26 0.00
13_A 52_R 1.24 0.00
156_L 138_S 1.24 0.00
37_Q 158_Q 1.23 0.00
12_I 14_I 1.22 0.00
65_L 81_I 1.21 0.00
105_A 105_L 1.16 0.00
148_I 70_I 1.13 0.00
82_R 96_D 1.13 0.00
49_R 108_V 1.11 0.00
29_L 153_H 1.11 0.00
33_I 105_L 1.09 0.00
21_C 37_A 1.08 0.00
131_G 141_F 1.07 0.00
53_D 80_G 1.06 0.00
38_K 72_V 1.06 0.00
104_Q 122_S 1.05 0.00
148_I 155_P 1.04 0.00
135_I 198_H 1.03 0.00
148_I 101_R 1.02 0.00
145_N 58_I 1.02 0.00
111_A 42_S 1.01 0.00
91_K 96_D 1.01 0.00
112_E 120_V 1.01 0.00
29_L 196_E 1.00 0.00
63_D 196_E 1.00 0.00
129_V 16_L 1.00 0.00
76_I 83_L 0.99 0.00
93_E 42_S 0.99 0.00
111_A 28_V 0.98 0.00
13_A 43_V 0.97 0.00
124_V 142_A 0.97 0.00
155_E 161_F 0.97 0.00
35_K 22_N 0.97 0.00
144_A 60_V 0.97 0.00
116_A 13_G 0.97 0.00
98_R 101_R 0.97 0.00
76_I 45_D 0.96 0.00
65_L 43_V 0.96 0.00
66_K 136_V 0.96 0.00
70_A 192_A 0.95 0.00
58_K 92_F 0.95 0.00
17_F 92_F 0.95 0.00
46_S 8_L 0.95 0.00
102_V 105_L 0.94 0.00
92_A 136_V 0.94 0.00
43_G 107_Q 0.94 0.00
17_F 52_R 0.93 0.00
8_L 76_P 0.93 0.00
25_V 133_F 0.93 0.00
25_V 136_V 0.93 0.00
71_E 195_G 0.92 0.00
154_A 9_L 0.92 0.00
42_D 148_V 0.91 0.00
125_A 76_P 0.91 0.00
46_S 102_V 0.91 0.00
81_K 107_Q 0.91 0.00
60_S 58_I 0.91 0.00
118_E 142_A 0.91 0.00
55_D 155_P 0.90 0.00
42_D 48_E 0.90 0.00
24_Y 187_K 0.90 0.00
95_E 161_F 0.90 0.00
33_I 153_H 0.90 0.00
109_I 144_L 0.90 0.00
63_D 182_V 0.89 0.00
110_E 175_L 0.89 0.00
129_V 14_I 0.89 0.00
128_A 154_L 0.89 0.00
110_E 81_I 0.89 0.00
97_E 96_D 0.89 0.00
98_R 42_S 0.88 0.00
123_Q 166_G 0.87 0.00
152_L 141_F 0.87 0.00
61_A 120_V 0.87 0.00
3_L 86_V 0.87 0.00
76_I 109_Q 0.87 0.00
82_R 70_I 0.87 0.00
25_V 134_D 0.87 0.00
154_A 43_V 0.86 0.00
80_N 37_A 0.86 0.00
122_K 74_T 0.86 0.00
41_A 198_H 0.85 0.00
57_A 141_F 0.85 0.00
61_A 161_F 0.85 0.00
109_I 61_A 0.85 0.00
51_H 86_V 0.84 0.00
17_F 90_A 0.84 0.00
13_A 16_L 0.84 0.00
118_E 138_S 0.84 0.00
88_D 133_F 0.84 0.00
124_V 146_D 0.83 0.00
88_D 135_G 0.83 0.00
42_D 120_V 0.83 0.00
100_K 142_A 0.83 0.00
98_R 28_V 0.83 0.00
54_L 141_F 0.83 0.00
24_Y 195_G 0.83 0.00
54_L 172_E 0.83 0.00
76_I 59_V 0.83 0.00
24_Y 91_H 0.83 0.00
133_E 63_Y 0.82 0.00
9_G 143_S 0.82 0.00
83_R 108_V 0.82 0.00
111_A 102_V 0.82 0.00
152_L 114_L 0.82 0.00
113_R 124_V 0.82 0.00
12_I 97_S 0.82 0.00
86_I 169_P 0.82 0.00
101_I 98_L 0.82 0.00
139_S 70_I 0.82 0.00
122_K 136_V 0.82 0.00
35_K 182_V 0.81 0.00
104_Q 202_I 0.81 0.00
100_K 50_L 0.81 0.00
111_A 101_R 0.81 0.00
103_A 27_Y 0.81 0.00
147_D 50_L 0.81 0.00
145_N 8_L 0.81 0.00
9_G 95_L 0.81 0.00
7_I 16_L 0.81 0.00
68_A 78_L 0.81 0.00
17_F 97_S 0.81 0.00
113_R 101_R 0.80 0.00
111_A 23_Q 0.80 0.00
50_A 135_G 0.80 0.00
5_A 50_L 0.80 0.00
24_Y 156_G 0.80 0.00
46_S 12_A 0.80 0.00
106_Q 21_K 0.79 0.00
84_S 17_T 0.79 0.00
101_I 200_V 0.79 0.00
126_I 9_L 0.79 0.00
148_I 102_V 0.79 0.00
17_F 37_A 0.79 0.00
141_D 145_N 0.79 0.00
92_A 202_I 0.79 0.00
139_S 95_L 0.79 0.00
81_K 138_S 0.79 0.00
23_K 111_E 0.79 0.00
79_A 74_T 0.79 0.00
77_E 37_A 0.79 0.00
75_I 92_F 0.78 0.00
3_L 194_D 0.78 0.00
153_V 50_L 0.78 0.00
38_K 198_H 0.78 0.00
146_S 76_P 0.78 0.00
39_E 89_E 0.78 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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