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OPENSEQ.org
YDIO - YDIR
UniProt: P0A9U8 - P77378
Length: 695
Sequences: 683
Seq/Len: 0.99
I_Prob: 0.00
YDIO - Probable acyl-CoA dehydrogenase YdiO
Paralog alert: 0.77 [within 20: 0.28] - ratio of genomes with paralogs
Cluster includes: CAIA YDIO 		YDIR - Putative electron transfer flavoprotein subunit YdiR
Paralog alert: 0.42 [within 20: 0.01] - ratio of genomes with paralogs
Cluster includes: FIXB YDIR YGCQ
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
167_V 191_L 0.95 0.00
215_N 281_K 0.93 0.00
134_N 98_L 0.83 0.00
125_T 41_A 0.82 0.00
5_L 293_Y 0.81 0.00
137_T 224_V 0.79 0.00
149_I 283_K 0.79 0.00
131_S 284_N 0.78 0.00
374_R 35_V 0.76 0.00
149_I 310_L 0.75 0.00
337_M 310_L 0.75 0.00
12_L 56_A 0.75 0.00
258_E 10_F 0.74 0.00
190_K 196_R 0.74 0.00
280_I 243_I 0.73 0.00
214_D 282_D 0.72 0.00
214_D 281_K 0.72 0.00
102_A 222_A 0.69 0.00
60_F 196_R 0.68 0.00
273_P 301_K 0.67 0.00
12_L 31_V 0.67 0.00
348_V 88_T 0.67 0.00
6_T 254_L 0.67 0.00
323_A 197_V 0.67 0.00
342_Y 227_S 0.67 0.00
260_A 30_Q 0.66 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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