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OPENSEQ.org

PPIC - RSMA
UniProt: P0A9L5 - P06992
Length: 366
Sequences: 355
Seq/Len: 1.01
I_Prob: 0.00

PPIC - Peptidyl-prolyl cis-trans isomerase C
Paralog alert: 0.67 [within 20: 0.18] - ratio of genomes with paralogs
Cluster includes: PPIC
RSMA - Ribosomal RNA small subunit methyltransferase A
Paralog alert: 0.09 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: RSMA
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
52_E 245_P 1.32 0.00
68_S 65_I 1.25 0.00
42_P 191_V 1.19 0.00
74_P 254_V 1.10 0.00
34_L 225_I 1.06 0.00
50_L 88_Y 1.01 0.00
90_L 62_L 1.01 0.00
4_T 142_K 1.00 0.00
7_A 161_S 0.98 0.00
61_A 65_I 0.96 0.00
28_G 152_P 0.95 0.00
20_D 257_Y 0.95 0.00
57_Q 87_I 0.95 0.00
7_A 260_M 0.94 0.00
63_D 194_L 0.92 0.00
74_P 118_I 0.92 0.00
87_I 208_R 0.90 0.00
24_Q 120_T 0.89 0.00
11_L 110_V 0.89 0.00
32_G 18_N 0.88 0.00
6_A 62_L 0.88 0.00
84_Y 137_H 0.87 0.00
11_L 64_V 0.86 0.00
66_V 133_I 0.85 0.00
30_D 204_V 0.85 0.00
70_P 243_I 0.84 0.00
22_L 162_V 0.84 0.00
9_H 133_I 0.84 0.00
68_S 106_Q 0.83 0.00
77_P 151_G 0.83 0.00
86_I 100_L 0.83 0.00
43_S 127_F 0.82 0.00
41_C 148_L 0.82 0.00
87_I 264_L 0.82 0.00
41_C 59_L 0.82 0.00
18_A 41_M 0.82 0.00
5_A 41_M 0.81 0.00
64_K 96_N 0.81 0.00
90_L 153_N 0.81 0.00
19_L 154_S 0.80 0.00
51_G 245_P 0.80 0.00
80_T 156_A 0.80 0.00
93_N 217_A 0.80 0.00
79_H 93_M 0.79 0.00
89_V 238_L 0.79 0.00
3_K 94_T 0.79 0.00
52_E 243_I 0.79 0.00
24_Q 11_A 0.78 0.00
87_I 211_S 0.78 0.00
59_V 254_V 0.78 0.00
89_V 127_F 0.78 0.00
12_V 169_N 0.78 0.00
78_L 11_A 0.77 0.00
9_H 166_Y 0.77 0.00
13_K 154_S 0.76 0.00
22_L 156_A 0.76 0.00
61_A 213_I 0.75 0.00
81_Q 225_I 0.75 0.00
75_T 239_T 0.75 0.00
21_L 84_K 0.75 0.00
25_I 158_G 0.75 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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