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RPOA - RS13
UniProt: P0A7Z4 - P0A7S9
Length: 447
Sequences: 822
Seq/Len: 1.87
I_Prob: 0.14

RPOA - DNA-directed RNA polymerase subunit alpha
Paralog alert: 0.02 [within 20: 0.01] - ratio of genomes with paralogs
Cluster includes: RPOA
RS13 - 30S ribosomal protein S13
Paralog alert: 0.03 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: RS13
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
175_A 30_S 1.39 0.14
310_R 113_R 1.35 0.13
110_V 18_A 1.24 0.09
293_P 8_N 1.22 0.09
197_D 18_A 1.17 0.07
285_T 68_D 1.17 0.07
46_I 52_Q 1.07 0.06
248_E 30_S 1.06 0.05
71_K 49_S 1.01 0.04
162_E 18_A 1.01 0.04
127_Q 40_A 1.00 0.04
154_P 55_T 0.99 0.04
146_V 18_A 0.99 0.04
124_V 28_T 0.98 0.04
35_F 47_E 0.97 0.04
171_L 58_D 0.93 0.03
85_L 9_I 0.93 0.03
63_G 49_S 0.91 0.03
12_R 112_P 0.91 0.03
25_K 41_E 0.91 0.03
196_T 85_C 0.90 0.03
177_Y 17_I 0.89 0.03
178_S 34_L 0.89 0.03
168_I 28_T 0.89 0.03
192_V 38_G 0.89 0.03
197_D 114_K 0.89 0.03
139_S 55_T 0.89 0.03
148_R 37_A 0.88 0.03
277_Y 83_L 0.86 0.03
180_V 7_I 0.85 0.03
80_E 41_E 0.85 0.03
173_V 60_V 0.85 0.03
177_Y 117_K 0.85 0.03
289_L 93_R 0.85 0.03
278_I 53_I 0.85 0.03
54_C 112_P 0.85 0.03
126_P 49_S 0.84 0.02
121_V 56_L 0.84 0.02
248_E 73_I 0.84 0.02
133_L 85_C 0.84 0.02
129_V 50_E 0.84 0.02
99_I 114_K 0.83 0.02
140_I 20_T 0.83 0.02
25_K 63_F 0.82 0.02
110_V 101_R 0.82 0.02
280_D 8_N 0.82 0.02
226_E 103_K 0.82 0.02
212_D 49_S 0.82 0.02
105_S 47_E 0.81 0.02
266_S 110_K 0.81 0.02
295_L 103_K 0.80 0.02
71_K 38_G 0.80 0.02
185_Y 51_G 0.80 0.02
3_G 21_S 0.80 0.02
200_K 63_F 0.80 0.02
237_V 7_I 0.80 0.02
79_L 21_S 0.79 0.02
77_D 102_T 0.79 0.02
251_P 93_R 0.79 0.02
140_I 28_T 0.79 0.02
273_E 34_L 0.79 0.02
88_L 97_V 0.79 0.02
255_R 15_A 0.79 0.02
307_L 106_A 0.79 0.02
90_V 50_E 0.78 0.02
68_Y 14_H 0.78 0.02
154_P 82_D 0.78 0.02
282_V 101_R 0.77 0.02
311_G 36_A 0.77 0.02
79_L 92_R 0.76 0.02
99_I 7_I 0.76 0.02
309_S 39_I 0.76 0.02
272_A 71_R 0.76 0.02
18_Q 31_K 0.76 0.02
288_E 58_D 0.75 0.02
72_E 28_T 0.75 0.02
177_Y 76_S 0.75 0.02
136_E 59_E 0.75 0.02
239_Q 30_S 0.75 0.02
308_A 59_E 0.74 0.02
178_S 101_R 0.74 0.02
15_D 53_I 0.74 0.02
162_E 17_I 0.73 0.02
39_L 2_A 0.73 0.02
267_A 83_L 0.73 0.01
227_Q 83_L 0.73 0.01
169_G 93_R 0.73 0.01
285_T 112_P 0.73 0.01
152_Y 9_I 0.73 0.01
181_E 81_M 0.73 0.01
156_S 34_L 0.73 0.01
272_A 44_K 0.73 0.01
298_K 68_D 0.73 0.01
25_K 9_I 0.73 0.01
51_M 14_H 0.72 0.01
78_I 5_A 0.72 0.01
86_K 6_G 0.72 0.01
90_V 32_A 0.72 0.01
210_T 11_D 0.72 0.01
146_V 82_D 0.72 0.01
79_L 51_G 0.72 0.01
62_D 116_I 0.72 0.01
114_D 72_E 0.71 0.01
253_L 30_S 0.71 0.01
209_G 80_L 0.71 0.01
271_K 57_R 0.71 0.01
146_V 30_S 0.71 0.01
8_F 50_E 0.71 0.01
120_D 18_A 0.71 0.01
80_E 104_T 0.71 0.01
197_D 25_V 0.71 0.01
126_P 55_T 0.71 0.01
189_A 81_M 0.71 0.01
31_L 57_R 0.71 0.01
310_R 52_Q 0.71 0.01
144_I 12_H 0.71 0.01
189_A 89_L 0.71 0.01
21_S 114_K 0.70 0.01
105_S 56_L 0.70 0.01
97_E 49_S 0.70 0.01
10_K 7_I 0.70 0.01
135_D 53_I 0.70 0.01
205_M 98_R 0.70 0.01
155_A 53_I 0.70 0.01
71_K 68_D 0.70 0.01
90_V 40_A 0.70 0.01
185_Y 18_A 0.70 0.01
147_Q 31_K 0.70 0.01
107_I 52_Q 0.70 0.01
104_K 93_R 0.70 0.01
24_A 80_L 0.69 0.01
95_K 73_I 0.69 0.01
22_T 43_V 0.69 0.01
187_V 37_A 0.69 0.01
211_I 86_Y 0.69 0.01
199_D 75_M 0.69 0.01
267_A 8_N 0.69 0.01
157_T 73_I 0.69 0.01
150_R 113_R 0.69 0.01
301_T 44_K 0.69 0.01
31_L 11_D 0.69 0.01
258_D 5_A 0.69 0.01
202_V 92_R 0.68 0.01
271_K 20_T 0.68 0.01
97_E 30_S 0.68 0.01
314_L 16_V 0.68 0.01
317_R 15_A 0.68 0.01
130_I 85_C 0.68 0.01
37_H 9_I 0.68 0.01
241_E 40_A 0.68 0.01
53_G 8_N 0.68 0.01
119_G 17_I 0.68 0.01
35_F 13_K 0.68 0.01
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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