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RL29 - RPOA
UniProt: P0A7M6 - P0A7Z4
Length: 392
Sequences: 575
Seq/Len: 1.49
I_Prob: 0.17

RL29 - 50S ribosomal protein L29
Paralog alert: 0.00 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: RL29
RPOA - DNA-directed RNA polymerase subunit alpha
Paralog alert: 0.02 [within 20: 0.01] - ratio of genomes with paralogs
Cluster includes: RPOA
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
49_D 182_R 1.50 0.17
47_R 205_M 1.34 0.11
36_Q 7_E 1.23 0.08
12_E 305_D 1.19 0.07
52_R 204_E 1.16 0.06
12_E 182_R 1.13 0.06
9_K 70_T 1.04 0.04
53_V 156_S 1.04 0.04
5_E 69_S 1.03 0.04
47_R 108_G 1.01 0.04
38_Q 95_K 1.00 0.04
18_L 282_V 1.00 0.04
62_G 325_S 1.00 0.04
47_R 87_G 1.00 0.04
57_L 131_C 1.00 0.04
31_Q 208_N 0.99 0.04
40_S 297_K 0.98 0.03
17_E 28_L 0.97 0.03
5_E 117_H 0.97 0.03
7_R 154_P 0.94 0.03
9_K 104_K 0.94 0.03
25_Q 306_V 0.93 0.03
30_M 289_L 0.93 0.03
18_L 196_T 0.92 0.03
48_R 103_N 0.92 0.03
14_L 46_I 0.92 0.03
47_R 129_V 0.91 0.03
62_G 124_V 0.91 0.03
53_V 130_I 0.90 0.03
52_R 112_A 0.88 0.02
18_L 173_V 0.87 0.02
12_E 35_F 0.86 0.02
37_L 202_V 0.86 0.02
44_K 309_S 0.86 0.02
30_M 272_A 0.85 0.02
12_E 116_T 0.83 0.02
50_V 48_L 0.83 0.02
5_E 115_I 0.83 0.02
46_V 39_L 0.82 0.02
44_K 172_L 0.82 0.02
31_Q 65_L 0.81 0.02
55_T 47_L 0.81 0.02
8_E 10_K 0.81 0.02
59_E 146_V 0.80 0.02
18_L 180_V 0.80 0.02
43_L 96_D 0.79 0.02
14_L 115_I 0.79 0.02
10_S 242_V 0.79 0.02
12_E 216_A 0.79 0.02
6_L 139_S 0.78 0.01
17_E 185_Y 0.78 0.01
49_D 279_G 0.77 0.01
52_R 125_K 0.76 0.01
48_R 141_S 0.76 0.01
56_L 96_D 0.76 0.01
9_K 204_E 0.76 0.01
13_E 69_S 0.76 0.01
53_V 220_A 0.76 0.01
46_V 10_K 0.76 0.01
43_L 291_K 0.76 0.01
42_L 39_L 0.75 0.01
58_N 211_I 0.75 0.01
32_A 71_K 0.75 0.01
26_F 267_A 0.74 0.01
35_G 54_C 0.74 0.01
59_E 102_L 0.74 0.01
50_V 27_T 0.74 0.01
22_L 51_M 0.73 0.01
10_S 136_E 0.73 0.01
21_L 185_Y 0.73 0.01
62_G 3_G 0.73 0.01
50_V 188_E 0.73 0.01
47_R 262_L 0.72 0.01
42_L 293_P 0.72 0.01
48_R 214_E 0.71 0.01
26_F 29_E 0.71 0.01
50_V 59_V 0.71 0.01
43_L 51_M 0.71 0.01
30_M 193_E 0.71 0.01
8_E 100_L 0.71 0.01
33_A 272_A 0.71 0.01
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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