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OPENSEQ.org

RL20 - SYFB
UniProt: P0A7L3 - P07395
Length: 913
Sequences: 732
Seq/Len: 0.80
I_Prob: 0.00

RL20 - 50S ribosomal protein L20
Paralog alert: 0.01 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: RL20
SYFB - Phenylalanine--tRNA ligase beta subunit
Paralog alert: 0.00 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: SYFB
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
115_A 656_G 1.22 0.00
14_H 515_F 1.15 0.00
110_V 214_P 1.14 0.00
89_E 50_V 1.13 0.00
37_Q 349_R 1.03 0.00
13_R 218_G 1.00 0.00
41_K 576_F 0.98 0.00
32_Y 675_L 0.98 0.00
91_D 362_R 0.98 0.00
101_F 727_C 0.97 0.00
79_F 331_V 0.94 0.00
32_Y 474_I 0.93 0.00
90_I 147_I 0.92 0.00
111_E 145_T 0.92 0.00
51_R 316_I 0.91 0.00
88_V 419_H 0.91 0.00
85_K 119_L 0.90 0.00
108_A 356_A 0.90 0.00
24_Y 562_R 0.89 0.00
41_K 573_G 0.89 0.00
13_R 412_K 0.88 0.00
13_R 332_L 0.88 0.00
16_K 576_F 0.87 0.00
79_F 34_G 0.86 0.00
96_A 234_M 0.86 0.00
93_K 32_V 0.84 0.00
17_I 216_Y 0.84 0.00
25_Y 723_I 0.84 0.00
12_A 763_Q 0.84 0.00
25_Y 94_T 0.83 0.00
53_R 548_L 0.83 0.00
12_A 521_Q 0.83 0.00
42_A 27_M 0.83 0.00
17_I 428_D 0.83 0.00
113_A 355_D 0.83 0.00
17_I 427_T 0.82 0.00
6_R 616_D 0.82 0.00
51_R 521_Q 0.82 0.00
12_A 762_L 0.82 0.00
27_A 435_C 0.81 0.00
38_A 568_R 0.81 0.00
88_V 198_T 0.81 0.00
53_R 238_L 0.80 0.00
113_A 681_V 0.80 0.00
53_R 668_E 0.80 0.00
74_I 377_T 0.79 0.00
80_I 286_T 0.79 0.00
91_D 385_G 0.78 0.00
51_R 544_M 0.78 0.00
90_I 65_T 0.78 0.00
80_I 652_I 0.78 0.00
75_S 469_Y 0.78 0.00
75_S 670_E 0.78 0.00
88_V 269_K 0.78 0.00
22_K 771_E 0.77 0.00
20_Q 471_Y 0.77 0.00
110_V 726_E 0.77 0.00
12_A 485_M 0.77 0.00
97_D 149_E 0.77 0.00
86_A 777_T 0.77 0.00
79_F 520_V 0.76 0.00
89_E 121_S 0.76 0.00
93_K 179_V 0.76 0.00
30_R 732_V 0.76 0.00
109_L 207_V 0.76 0.00
78_K 767_R 0.76 0.00
32_Y 686_W 0.76 0.00
111_E 689_L 0.76 0.00
75_S 104_K 0.76 0.00
41_K 301_T 0.76 0.00
25_Y 236_E 0.75 0.00
25_Y 158_I 0.75 0.00
109_L 659_I 0.75 0.00
112_K 553_L 0.75 0.00
5_K 645_H 0.75 0.00
17_I 273_E 0.75 0.00
117_L 540_E 0.75 0.00
93_K 121_S 0.75 0.00
41_K 408_L 0.75 0.00
24_Y 575_R 0.75 0.00
40_I 479_V 0.74 0.00
109_L 279_R 0.74 0.00
80_I 136_E 0.74 0.00
96_A 615_Y 0.74 0.00
110_V 497_R 0.74 0.00
16_K 708_R 0.74 0.00
79_F 597_C 0.74 0.00
47_Y 573_G 0.74 0.00
52_Q 356_A 0.74 0.00
51_R 779_A 0.74 0.00
28_R 30_L 0.74 0.00
101_F 739_N 0.74 0.00
28_R 616_D 0.73 0.00
53_R 17_D 0.73 0.00
13_R 496_K 0.73 0.00
109_L 738_V 0.73 0.00
94_I 69_V 0.73 0.00
53_R 170_L 0.73 0.00
79_F 380_L 0.73 0.00
104_V 445_Q 0.73 0.00
98_I 339_S 0.73 0.00
41_K 203_L 0.73 0.00
59_Q 155_D 0.72 0.00
84_K 775_A 0.72 0.00
51_R 298_N 0.72 0.00
38_A 27_M 0.72 0.00
98_I 468_V 0.72 0.00
32_Y 497_R 0.72 0.00
91_D 616_D 0.72 0.00
53_R 713_V 0.72 0.00
41_K 63_R 0.72 0.00
91_D 79_C 0.71 0.00
42_A 119_L 0.71 0.00
12_A 732_V 0.71 0.00
16_K 618_K 0.71 0.00
110_V 246_I 0.71 0.00
103_K 186_P 0.71 0.00
107_T 52_E 0.71 0.00
68_A 497_R 0.71 0.00
79_F 717_N 0.71 0.00
75_S 785_L 0.71 0.00
98_I 664_V 0.71 0.00
102_D 534_P 0.71 0.00
75_S 173_I 0.70 0.00
90_I 761_I 0.70 0.00
81_N 119_L 0.70 0.00
116_A 230_T 0.70 0.00
96_A 722_D 0.70 0.00
28_R 256_V 0.70 0.00
87_S 234_M 0.70 0.00
53_R 676_N 0.70 0.00
45_Y 164_P 0.70 0.00
53_R 459_E 0.70 0.00
51_R 324_V 0.70 0.00
90_I 758_I 0.70 0.00
39_V 545_R 0.70 0.00
53_R 572_S 0.70 0.00
41_K 514_S 0.70 0.00
55_R 618_K 0.70 0.00
110_V 481_A 0.70 0.00
31_V 289_L 0.70 0.00
51_R 518_P 0.69 0.00
8_V 348_R 0.69 0.00
80_I 673_L 0.69 0.00
10_A 616_D 0.69 0.00
104_V 237_K 0.69 0.00
89_E 658_R 0.69 0.00
96_A 164_P 0.69 0.00
42_A 136_E 0.69 0.00
43_G 70_G 0.69 0.00
72_N 61_K 0.69 0.00
89_E 653_Y 0.69 0.00
51_R 245_S 0.69 0.00
103_K 4_S 0.68 0.00
71_Q 572_S 0.68 0.00
53_R 154_D 0.68 0.00
88_V 139_A 0.68 0.00
41_K 746_G 0.68 0.00
31_V 295_A 0.68 0.00
97_D 148_R 0.68 0.00
110_V 95_I 0.68 0.00
100_V 167_A 0.68 0.00
51_R 313_M 0.68 0.00
88_V 440_G 0.68 0.00
68_A 21_L 0.68 0.00
63_A 147_I 0.68 0.00
24_Y 5_E 0.68 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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