| UniProt: | P07363 - P0AE67 | ||
| Length: | 783 | ||
| Sequences: | 1547 | ||
| Seq/Len: | 2.02 | ||
| I_Prob: | 0.00 |
| CHEA - Chemotaxis protein CheA
Paralog alert: 0.28 [within 20: 0.01] - ratio of genomes with paralogs Cluster includes: CHEA |
CHEY - Chemotaxis protein CheY Paralog alert: 0.92 [within 20: 0.69] - ratio of genomes with paralogs Cluster includes: CHEY |
Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
| 3kyj | A:B | Contact Map |
| 4euk | A:B | Contact Map |
| 2r25 | B:A | Contact Map |
| i | j | Scaled Score | I_Prob |
| 614_Y | 11_V | 0.99 | 0.00 |
| 499_T | 52_G | 0.97 | 0.00 |
| 398_N | 41_D | 0.87 | 0.00 |
| 468_V | 107_V | 0.84 | 0.00 |
| 475_M | 18_R | 0.83 | 0.00 |
| 38_E | 84_L | 0.82 | 0.00 |
| 368_E | 11_V | 0.80 | 0.00 |
| 62_L | 106_Y | 0.80 | 0.00 |
| 121_Q | 33_V | 0.79 | 0.00 |
| 8_F | 23_N | 0.77 | 0.00 |
| 538_R | 47_Q | 0.75 | 0.00 |
| 340_V | 8_F | 0.75 | 0.00 |
| 400_V | 70_K | 0.75 | 0.00 |
| 499_T | 10_V | 0.73 | 0.00 |
| 136_S | 54_V | 0.73 | 0.00 |
| 504_L | 97_A | 0.73 | 0.00 |
| 65_T | 67_E | 0.72 | 0.00 |
| 148_E | 54_V | 0.72 | 0.00 |
| 484_K | 54_V | 0.70 | 0.00 |
| 56_T | 16_T | 0.69 | 0.00 |
Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)
Text file of predictions (includes both intra and inter preds)