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OPENSEQ.org

CHEA - CHER
UniProt: P07363 - P07364
Length: 940
Sequences: 792
Seq/Len: 0.87
I_Prob: 0.01

CHEA - Chemotaxis protein CheA
Paralog alert: 0.28 [within 20: 0.01] - ratio of genomes with paralogs
Cluster includes: CHEA
CHER - Chemotaxis protein methyltransferase
Paralog alert: 0.36 [within 20: 0.01] - ratio of genomes with paralogs
Cluster includes: CHER
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
341_R 130_P 1.46 0.01
512_L 156_D 1.38 0.00
482_I 159_V 1.23 0.00
270_K 99_E 1.16 0.00
480_R 102_H 1.16 0.00
620_I 172_E 1.16 0.00
77_R 92_N 1.10 0.00
44_F 92_N 1.09 0.00
514_G 99_E 1.09 0.00
604_Q 99_E 1.09 0.00
604_Q 262_H 1.05 0.00
514_G 102_H 1.05 0.00
285_Q 99_E 1.05 0.00
416_I 110_A 1.04 0.00
505_L 57_R 1.04 0.00
418_V 260_A 1.04 0.00
386_I 126_T 1.03 0.00
360_T 263_S 1.02 0.00
540_A 117_Y 1.02 0.00
604_Q 102_H 1.01 0.00
511_I 123_A 1.01 0.00
403_L 221_P 1.00 0.00
517_V 63_L 0.99 0.00
462_A 59_R 0.99 0.00
499_T 119_V 0.98 0.00
135_P 183_R 0.98 0.00
393_L 179_Q 0.97 0.00
585_L 73_L 0.97 0.00
271_V 156_D 0.96 0.00
594_L 227_I 0.96 0.00
310_L 273_F 0.96 0.00
476_D 261_G 0.96 0.00
327_M 128_E 0.96 0.00
62_L 123_A 0.96 0.00
414_I 132_S 0.96 0.00
481_N 91_T 0.96 0.00
641_Q 139_D 0.96 0.00
601_G 58_L 0.96 0.00
491_I 34_I 0.95 0.00
469_S 264_E 0.95 0.00
632_A 120_W 0.95 0.00
489_V 108_D 0.95 0.00
614_Y 102_H 0.95 0.00
40_L 111_R 0.95 0.00
473_V 261_G 0.95 0.00
473_V 92_N 0.94 0.00
466_T 28_R 0.94 0.00
449_E 207_D 0.94 0.00
563_E 265_N 0.93 0.00
290_Q 153_S 0.93 0.00
41_N 92_N 0.93 0.00
93_E 153_S 0.92 0.00
499_T 70_L 0.92 0.00
481_N 241_Q 0.92 0.00
372_D 112_R 0.92 0.00
447_D 161_E 0.92 0.00
513_D 102_H 0.91 0.00
53_G 99_E 0.91 0.00
381_S 267_S 0.91 0.00
533_E 125_S 0.91 0.00
62_L 233_M 0.90 0.00
370_I 241_Q 0.90 0.00
489_V 227_I 0.90 0.00
531_V 244_I 0.90 0.00
517_V 130_P 0.90 0.00
381_S 224_F 0.90 0.00
208_I 126_T 0.90 0.00
359_S 97_F 0.90 0.00
433_K 87_N 0.89 0.00
23_M 190_G 0.89 0.00
556_G 265_N 0.89 0.00
264_I 166_G 0.89 0.00
57_F 92_N 0.89 0.00
552_L 198_V 0.88 0.00
594_L 66_F 0.88 0.00
368_E 27_F 0.88 0.00
351_V 245_L 0.88 0.00
513_D 262_H 0.88 0.00
49_S 218_Y 0.87 0.00
55_G 85_F 0.87 0.00
50_I 102_H 0.87 0.00
377_L 155_I 0.87 0.00
513_D 99_E 0.87 0.00
279_G 262_H 0.87 0.00
434_A 255_D 0.86 0.00
589_G 155_I 0.86 0.00
513_D 91_T 0.86 0.00
623_A 241_Q 0.86 0.00
430_I 247_R 0.86 0.00
321_V 158_E 0.86 0.00
517_V 55_V 0.86 0.00
74_D 241_Q 0.86 0.00
278_V 241_Q 0.85 0.00
521_D 202_L 0.85 0.00
526_L 274_T 0.85 0.00
309_Q 152_A 0.85 0.00
53_G 95_A 0.85 0.00
62_L 128_E 0.85 0.00
20_L 172_E 0.85 0.00
542_L 62_G 0.85 0.00
530_A 22_L 0.85 0.00
563_E 34_I 0.85 0.00
528_L 69_Y 0.85 0.00
74_D 57_R 0.84 0.00
50_I 240_T 0.84 0.00
509_L 40_I 0.84 0.00
325_R 234_I 0.84 0.00
359_S 184_Y 0.84 0.00
286_S 48_D 0.84 0.00
53_G 212_N 0.84 0.00
620_I 69_Y 0.84 0.00
360_T 159_V 0.84 0.00
383_D 264_E 0.84 0.00
473_V 234_I 0.84 0.00
627_G 89_L 0.84 0.00
547_G 121_S 0.84 0.00
25_Q 152_A 0.84 0.00
317_L 229_C 0.83 0.00
452_M 103_F 0.83 0.00
562_V 155_I 0.83 0.00
290_Q 31_S 0.83 0.00
592_Y 123_A 0.83 0.00
270_K 31_S 0.83 0.00
278_V 92_N 0.82 0.00
386_I 225_D 0.82 0.00
425_L 171_E 0.82 0.00
630_S 206_V 0.82 0.00
459_F 261_G 0.82 0.00
286_S 102_H 0.82 0.00
437_Q 227_I 0.82 0.00
572_G 121_S 0.82 0.00
617_V 59_R 0.82 0.00
285_Q 262_H 0.82 0.00
319_E 103_F 0.82 0.00
609_N 56_R 0.82 0.00
364_K 45_H 0.82 0.00
562_V 183_R 0.82 0.00
605_V 99_E 0.82 0.00
125_Q 165_S 0.81 0.00
220_Q 254_P 0.81 0.00
253_E 167_I 0.81 0.00
351_V 181_L 0.81 0.00
463_E 227_I 0.81 0.00
490_E 177_T 0.81 0.00
375_T 89_L 0.81 0.00
480_R 99_E 0.81 0.00
371_I 283_L 0.81 0.00
412_G 102_H 0.81 0.00
23_M 121_S 0.81 0.00
526_L 202_L 0.81 0.00
508_T 42_L 0.81 0.00
322_M 128_E 0.81 0.00
526_L 80_G 0.81 0.00
24_E 40_I 0.81 0.00
531_V 273_F 0.81 0.00
633_L 259_F 0.81 0.00
599_L 30_I 0.81 0.00
519_V 233_M 0.81 0.00
417_E 181_L 0.81 0.00
519_V 256_G 0.80 0.00
285_Q 102_H 0.80 0.00
167_L 283_L 0.80 0.00
537_P 139_D 0.80 0.00
468_V 203_A 0.80 0.00
512_L 132_S 0.80 0.00
521_D 239_T 0.80 0.00
53_G 279_T 0.80 0.00
117_D 183_R 0.80 0.00
415_C 159_V 0.80 0.00
560_P 53_R 0.80 0.00
270_K 128_E 0.80 0.00
335_R 53_R 0.80 0.00
406_S 135_M 0.80 0.00
276_N 273_F 0.80 0.00
287_M 93_L 0.80 0.00
56_T 93_L 0.80 0.00
593_A 93_L 0.79 0.00
552_L 259_F 0.79 0.00
329_M 102_H 0.79 0.00
386_I 253_K 0.79 0.00
18_E 265_N 0.79 0.00
285_Q 88_S 0.79 0.00
324_I 101_H 0.79 0.00
531_V 222_G 0.79 0.00
256_T 177_T 0.79 0.00
623_A 245_L 0.79 0.00
395_A 239_T 0.79 0.00
44_F 99_E 0.79 0.00
258_S 253_K 0.79 0.00
354_T 244_I 0.78 0.00
477_V 63_L 0.78 0.00
270_K 102_H 0.78 0.00
558_Y 93_L 0.78 0.00
417_E 50_V 0.78 0.00
285_Q 93_L 0.78 0.00
125_Q 203_A 0.78 0.00
485_M 57_R 0.78 0.00
390_E 28_R 0.78 0.00
215_V 159_V 0.78 0.00
403_L 36_Q 0.78 0.00
551_V 156_D 0.78 0.00
560_P 46_K 0.78 0.00
409_H 91_T 0.78 0.00
524_F 130_P 0.78 0.00
278_V 159_V 0.78 0.00
50_I 91_T 0.78 0.00
140_R 64_T 0.77 0.00
107_Q 206_V 0.77 0.00
554_V 93_L 0.77 0.00
620_I 183_R 0.77 0.00
381_S 93_L 0.77 0.00
583_V 65_D 0.77 0.00
512_L 218_Y 0.77 0.00
23_M 125_S 0.77 0.00
24_E 102_H 0.77 0.00
399_S 23_S 0.77 0.00
475_M 166_G 0.77 0.00
430_I 54_L 0.77 0.00
520_A 103_F 0.77 0.00
427_R 62_G 0.77 0.00
409_H 46_K 0.77 0.00
121_Q 207_D 0.77 0.00
327_M 123_A 0.77 0.00
426_N 227_I 0.77 0.00
466_T 50_V 0.77 0.00
527_P 264_E 0.77 0.00
135_P 152_A 0.77 0.00
586_Q 93_L 0.77 0.00
619_G 66_F 0.76 0.00
364_K 66_F 0.76 0.00
311_Q 241_Q 0.76 0.00
412_G 125_S 0.76 0.00
342_D 103_F 0.76 0.00
608_K 91_T 0.76 0.00
40_L 166_G 0.76 0.00
59_F 181_L 0.76 0.00
524_F 138_A 0.76 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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