>seq_1
SVASQSIIAYTMSLGAENSVAYSNNSIAIPTNFTISVTTEILPVSMTKTSVDCTMYICGDSTECSNLLLQYGSFCTQLNRALTGIAVEQDKNTQEVFAQV
KQIYKTPPIKDFGGFNFSQILPDPSKPSKRSFIEDLLFNKVTLADAGFIKQYGDCLGDIAARDLICAQKFNGLTVLPPLLTDEMIAQYTSALLAGTITSG
WTFGAGAALQIPFAMQMAYRFNGIGVTQNVLYENQKLIANQFNSAIGKIQDSLSSTASALGKLQDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLD
KVEAEVQIDRLITGRLQSLQTYVTQQLIRAAEIRASANLAATKMSECVLGQSKRVDFCGKGYHLMSFPQSAPHGVVFLHVTYVPAQEKNFTTAPAICHDG
KAHFPREGVFVSNGTHWFVTQRNFYEPQIITTDNTFVSGNCDVVIGIVNNTVYDPLQPELDSFKEELDKYFKNHTSP
>tr|C0KYR1|C0KYR1_9BETC Spike protein OS=Murine coronavirus RA59/R13 PE=4 SV=1
-----RLTTF-EPYTPSVQSVDGLYEMQIPTNFTIGHHEEFIQTRSPKVTIDCAAFVCGDNTACRQQLVEYGSFCVNVNAILNEVNNLLDNMQLQVASAL
MQGVTISRLGPIDDINFSPLLGCIEDGRGRSAIEDLLFDKVKLSDVGFVEAYNNCTGGQEVRDLLCVQSFNGIKVLPPVLSESQISGYTTGATAAAMFPP
WSA----AAGVPFSLSVQYRINGLGVTMNVLSENQKMIASAFNNALGAIQDGFDATNSALGKIQSVVNANAEALNNLLNQLSNRFGAISASLQEILTRLE
AVEAKAQIDRLINGRLTALNAYISKQLSDSTLIKVSAAQAIEKVNECVKSQTTRINFCGNGNHILSLVQNAPYGLYFIHFSYVPISFTTANVSPGLCISD
RGLAPKAGYFVQDDGEWKFTGSSYYYPEPITDKNSVIMSSCAVNYTKAPEVFLNTSIPNPPDFKEELDKWFKNQTSI
>tr|U5NJG5|U5NJG5_9BETC Spike protein OS=Coronavirus Neoromicia/PML-PHE1/RSA/2011 GN=S PE=4 SV=2
-----GLGAYNSPLRV-DALNSSEFKVSLPLNFTFGVTQEYIETSIQKITVDCKQYVCNGFAKCEKLLEQYGQFCSKINQALHGANLRQDDSVRNLFESV
KTPQTV-PLGFGGEFNLTLLEPLSS-SNARSALEELLFDSVTIADPGYMQGYDDCMGPASARDLICAQYVAGYKVLPPLMDVNMEAAYTSSLLGSIAGAG
WTAGLSSFAAIPFAQSIFYRLNGVGITQQVLSENQKIIANKFNQALGAMQTGFTTTNEAFQKVQDAVNTNAQALAKLASELSNTFGAISSSIGDIIQRLD
VLEQEVQIDRLINGRLTTLNAFVAQQLVRSESAARSAQLAKDKVNECVKSQSTRSGFCGQGTHIVSFVINAPNGLYFMHVGYHPSQHIEVVAAYGLCDST
NCIAPVNGYFIKNQDEWSYTGSSFYAPEPITTLNTRYVAP-QVTFQNISNNLPPPSNSTGTDFKDELDEFFKNVSTN
>tr|U5LMM7|U5LMM7_9BETC S OS=Betacoronavirus Erinaceus/VMC/DEU/2012 PE=4 SV=1
-----ALVLFQNPLKV-SVLNSTEFQVSIPQNFSFGITEEFIETSIQKVTVDCKQYVCNGFERCEQLLVQYGQFCSKINQALHGVNLRQDDATKSLFEDI
KVPQSV-PLSLTGDYNLSLFEAPNN-NNYRSALEDLLFDKVTLSDPGYMKGYDECMGPPSARDLICAQYVSGYKVLPPLYDANMEAMYTASLTGSIAGSF
WTGGLSSAAALPFAQSMFYRMNGIGITQNVLMKNQREIANKFNQALGAMQTGFTATNQAFQKVQDVVNANAQALSKLASELANTFGAISASIGDILKRLD
VLEQEVQIDRLINGRLTSLNAFVSQQLVRSEAAARSSQLAKEKINECVKAQSTRSGFCGQGTHIVSFVINAPNGFYFIHVGYHPQDYVNQTAAYGLCDSK
KCIAAKNGYFVKNDGSWSYTGSSFYQPEPITTFNSRFVEP-EVTFQNLSNNLPPPSNNTDITFEDELEEFYKNITSE
>tr|D2E221|D2E221_9BETC Spike glycoprotein OS=SARS coronavirus MA15 ExoN1 PE=4 SV=1
-----SIVAYTMSL--ASSIAYSNNTIAIPTNFSISITTEVMPVSMAKTSVDCNMYICGDSTECANLLLQYGSFCTQLNRALSGIAAEQDRNTREVFAQV
KQMYKT-PTKYFGGFNFSQMLPDPLKPTKRSFIEDLLFNKVTLADAGFMKQYGECLGDINARDLICAQKFNGLTVLPPLLTDDMIAAYTAALVSGTATAG
WTFGAGAALQIPFAMQMAYRFNGIGVTQNVLYENQKQIANQFNKAISQIQESLTTTSTALGKLQDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLD
KVEAEVQIDRLITGRLQSLQTYVTQQLIRAAEIRASANLAATKMSECVLGQSKRVDFCGKGYHLMSFPQAAPHGVVFLHVTYVPSQERNFTTAPAICHEG
KAYFPREGVFVFNGTSWFITQRNFFSPQIITTDNTFVSGNCDVVIGIINNTVYDPLQPELDSFKEELDKYFKNHTSP
>tr|A3EXJ0|A3EXJ0_BCHK9 Spike glycoprotein OS=Bat coronavirus HKU9-4 GN=S PE=4 SV=1
-----TLVSF-QPGIISVKVLTPVYWVRVPTNFTLTATTEFIETTAPKITIDCARYLCGDSSRCLAVLEQYGTFCDDVNTALQRVNTMLDAAVVSLTSQL
VSDIVP-TENFDSTYNFTALMGCLSK---RSAISDLLYNKVKIADPGFMDSYQKCIWGGNIRDLICTQVFNGIAVLPPIVSPGMQALYTSLLVGAVASSG
YTFGITSVGVIPFATQLQFRLNGIGVTTQVLVDNQKLIASSFNNALNQIQKGFDATNSALSKIQAVINQHATQLQTLVLQLGNTFGAISSSINIIFSRLE
GLEADAEVDRLISGRMVVLNTYVTQLLVQASRIKAQSDLALQKINECVKSQTLRNEFCGNGTHVLSVPQLAPNGIMFIHYSYTPTQYATVQTAAGLCFNG
TGYAPRNGLFILPNNFWYFTQANFYNPVNISNSNTQVLESCSVNYTTVNYTILSPQEPLYNNFDEEFNKFYKNLSSV
>tr|F1DAZ9|F1DAZ9_9BETC Spike protein OS=Rousettus bat coronavirus/Kenya/KY06/2006 GN=S PE=4 SV=1
-----YLVNY-DPLYDNATPMTPVYWVKIPTNFTLTATDEFIQTNAPKVTIDCARYLCGDSSRCLNVLLHYGTFCDDINKALAKVNTILDGALLSLSKEL
SINTRD-IQAFGGDYNFTGLMGCLA-TTYRSALSDLLYDKVKITDPGFMQSYQKCIWGGSVRDLLCTQTYNGIAVLPPIVSPAMQALYTSLLVGAVASSG
YTFGITSAGVIPFATQLQFRLNGIGVTTQVLVENQKLIASSFNNALVNIQKGFTETSIALSKMQDVINQHAAQLQTLVTQLGNSFGAISSSINEIFSRLE
GLAANAEVDRLINGRMMVLNTYVTQLLLQASEAKAQNALAIQKISECVKAQSLRNDFCGNGTHVLSIPQLAPNGVLFIHYAYTPTDYALVQTSAGLCYNG
TGYAPLRGMFVLPNNMWHFTSMQFYNPVNISYSNTQILTSCSVNYTSVNYSVLQPSAPSDYDFQKEFDKFYKNLSTS
>tr|F1DAZ1|F1DAZ1_9BETC Spike protein OS=Eidolon bat coronavirus/Kenya/KY24/2006 GN=S PE=4 SV=1
-----ELVLY-DPLYD-LVPITPVYQIDVPTNFTLAATTEYIQTYASKISIDCSKYLCGDSVQCKNVLLQYGTFCNDVNTALTRVFSLLDTALVETVSSL
KSTA---PAAYTGDFNFTSLVGCLQ-NSYRSALSDLLFNKVSVADPGFMQAYQKCLWGGNIRDLICTQSFNGISVLPPIVSPSMQALYTTALVGGIAASG
FTFGVSSAAVIPFATQLQFRLNGLGVTTNVLMENQKLIANAFNKALVSIQTGFEATNQALNKIQTVVNHNALQLQALVQQLGNTFGAISSSVNEIFSRLD
QLEANAEVDRLISGRMVVLNTYVTQLLIQASELRSQAQLANQKMSECVKAQSSRNDFCGNGTHVFSIPQVAPNGMLFIHYSYQPTEYKQLYTTAGLCFNG
TGYVPKDGLFVREDTVWYFTKAAFYSPSNLSYDNTRQLDSCGVNYTVVNNTVLTPFEPPNFNFDEEFDKYFKNQSSQ
>tr|A3EXI2|A3EXI2_BCHK9 Spike glycoprotein OS=Bat coronavirus HKU9-3 GN=S PE=4 SV=1
-----SLVTY-DPTAAAVQLLTPVYWVSIPTNFTLAATSEYIQTSSPKINVDCAKYLCGDSDRCMNVLLQYGTFCDDVNKALAEVSATIDASVVSLMSEL
TSDVVR-NEQFDTTYNFTSLMGCLS-KMYRSALSDLLYNKVKVTDPGFMQSYQKCIWGGEIRDLMCTQTFNGIAVLPPIVSPGMQALYTSLLVGAVASAG
YTFGITSVGVVPFATQLQFRLNGIGVTTQVLVENQKLIANSFNNALTNIQKGFDATNEAISKMQLVINQHAQQLQTLVNQLGNSFGAISASINEIFSRLD
GLEADAQVDRLINGRTVVLNTYVTQLLIKATEVRSQALLAKQKISECVKAQSLRNDFCGNGTHVLSIPQLAPNGILFLHYTYKPTAFAVVQTAAGLCYNG
TGYAPVGGMFVLPNQAWHFTKMNFYNPVSITVENTQVLSTCGLNYSHVNYTVVNPSVPSDFDFEEEFNKWYKNHTSI
>tr|E0ZN60|E0ZN60_BCHK9 Spike glycoprotein OS=Bat coronavirus HKU9-10-2 GN=S PE=4 SV=1
-----SLVTY-DPTFQGVKVMSPVYWISIPTNFTLGAITEYIQTTSPKVNVDCVKYLCGDSERCTTVLLQYGTFCDDVNKALSEVSSIIDASMISLVSEI
TADVVR-SELFDTTYNFTGLLGCVDRTTYRSALSDLLYNKVKVTDPGFMSSYQKCIWGGDIRDLFCTQNFNGISVLPPIVSPGMQALYTSLLVGAVASAG
YTFGVTSVGVIPFATQLQFRLNGLGVTTQVLVENQQLIANSFNKALVSIQQGFDATNEALSKMQSVINQHAQQLQTLVSQLGNSFGAISSSINEIFSRLD
GLEANAQVDRLINGRMVVLNTYVTQLLIKASEVKSQALLAKQKISECVKSQSLRNDFCGNGTHVFSVPQLAPNGIMFLHYTYKPTSYALVQTAAGLCLNN
TGYAPRDGLFVLPNIYWQFTKMNFYNPVRLTNSNTQVLTTCSVNYTTVNYTVLPPTDNMDFNFTAEFEKWYKNHSSQ
>tr|A0A088DJY6|A0A088DJY6_9BETC Spike protein OS=Bat Hp-betacoronavirus/Zhejiang2013 PE=4 SV=1
-----LTFNY-MYFAQSQSVAFDNSTLQIPINFTIGIEYETIPVTMPKVTVDCAQYVCGDNSECRTLLVQYGTFCETINDALRGVALQQDVNQKDVFSSV
RRLAKVSPMGNLNGFNFSSILNQEN-FQARSAIEDLFFDKIETADVGFQKKYDECTGGSVVKDLGCAQSFNGLMVLPPQMTDAHVAAYTTSAA-------
---LG-SFFSIPNTMQMAYRFNGIAVTQKVLVDNQKQIANKFNQAMMSVQTGFKATSSALEKLQKVVNDNAQALNNLVAQLTNNFGAISSAINDITQRLD
KLEADAQIDRLINGRLQVLQTFVTQQLIRASEIRASAKLAAQKMSECVQGQSQRLDFCGRGMHLMSFPQAAPYGMVFLHVLYKPTDYINVTTVPAICSND
VAYFPVDGVFVYYNNSLMFTKRNYFEPEIITIDNIRSAGSCNVDVTYVNHTIYNPEMPELEDFKQELEEIRKNFSTG
>tr|F1BYL9|F1BYL9_9BETC Putative spike glycoprotein OS=Zaria bat coronavirus GN=S PE=4 SV=1
-----ESSTY-NYFFQS-EIPFSNFTVEIPDNFTIAIEYETLPIRMSKISVDCSRYVCGTDVVCANQLVQYGKFCDNINEALRGVSLQQDSNVAELLSDI
KQLTRVSDLKDINGFNFSSLYNTDS-SGRRSAIEDLLFNKVVTADVGFMKKYEECTGGSVFKDLDCAQSFNGLKVLPPQMSDAHVGVYTTAAA-------
---MG-SFFSIPNTMQMAYRFNGIAVTQSVLVDNQKEIANKFNQALTSIQQGFTATNSAVQKLQDVVNANAAALNTLVTQLGNNFGAISSAINDITQRLD
KLEAAVQIDRLINGRLQVLQTFVTQQLIMASEIRASAQLAKQKMSECVLSQSKRQDFCGRGLHLMSFPQSAPQGMVFLHVLYRPTSYINVTSTPAICSEN
KAYFPTDGVFVLHDNQWMITKRNFYDPVNISLSNVRYAGSCDVITTYANHTIFEPDNSTLQDFMHELEEIRKNLSMS
>tr|L7UP84|L7UP84_9BETC Spike glycoprotein OS=Betacoronavirus BtCoV/KW2E-F93/Nyc_spec/GHA/2010 PE=4 SV=1
-----TIKTFEKPLLL-DQLNSSMFQISVPXNFSFAVTQEFIETSIQKVTVDCKQYVCNGFARCEQLLQQYGQFCAKINQALHGTNIAQDDSIRSLFQAI
SVASSQ-PIGFGGDFNTSLLEPYDN-INGRSALEELIFNKVTVADPGYMQGYDECMGPPSARDLICAQYYGGYKVLPPLYDANMEAAYTASLVGAIAASP
WTAGVGSVAAVPFAESVMYRLNGIGITQQVLLENQKQIANKFNKALEAMQAGFDATNSALSKVQTAVNNNAMALNKLTQELSNTFGAISASIADILKRLD
TLEQDSQIDRLINGRLTTLNAFVSQQLVRAETARRGVQLAKDKVNECVKTQSKRNGFCGNGTHIVSFVVNAPNGLYFTHISYVPQSFVNATAAYGLCSNN
ICIAPVDGYFIQ--DSWQFTGASLYSPEPITTVNSRYATA-DVSYQNVSSNIPPPSNSTDVDFSDELEEFFKNVTSQ
>tr|A3EXA3|A3EXA3_BCHK4 Spike glycoprotein OS=Bat coronavirus HKU4-2 GN=S PE=4 SV=1
-----QLANYTSPIVV-TPINSSGFTAAIPTNFSFSVTQEYIETSIQKVTVDCKQYVCNGFTRCEKLLVEYGQFCSKINQALHGANLRQDESVYSLYSNI
KTTSTQ-TLGLNGDFNLTLLQVPQS-SSYRSAIEDLLFDKVTIADPGYMQGYDDCMGPQSARDLICAQYVSGYKVLPPLYDPNMEAAYTSSLLGSIAGAG
WTAGLSSFAAIPFAQSMFYRLNGVGITQQVLSENQKLIANKFNQALGAMQTGFTTSNLAFSKVQDAVNANAQALSKLASELSNTFGAISSSISDILARLD
TVEQDAQIDRLINGRLTSLNAFVSQQLVRSETAARSAQLASDKVNECVKSQSKRNGFCGSGTHIVSFVVNAPNGFYFFHVGYVPTNYTNVTAAYGLCNNP
LCIAPIDGYFITNQTEWYYTGSSFYKPEPITQANSRYVSS-DVKFDKLENNLPPPENSTDVDFKDELEEFFKNVTSH
>tr|A0A023Y9K3|A0A023Y9K3_9BETC Spike glycoprotein OS=BtVs-BetaCoV/SC2013 PE=4 SV=1
-----QLANFTQPHVL-NPLNSSGFVVEIPTNFSFGVTQEYIQTTIQKVTVDCKQYVCNGFAKCEQLLREYGQFCAKINQALHGANLRQDESIANLFANI
KTEATQ-PLGLNGDFNLTLLQVPKE-YSYRSAIEDLLFNKVTIADPGYMQGYDECMGPPSARDLICAQFVAGYKVLPPLYDPNMEAAYTSSLVGSILGAG
WTAGASSFAAIPFAQSVFFRMNGIGITQQVLSENQKQIANKFNQALGAMQTGFTTTNLAFSKVQDAVNANAQALSKLASELSNTFGAISSSISDILKRLD
AVEQEAQIDRLINGRLTSLNAFVAQQLVRSETAARSAQLASDKVNECVKSQSKRNGFCGSGTHIVSFVINAPNGLYFFHVGFVPTSFVNATAAYGLCNTP
RCIAPIDGYFVLNSQEWYYTGSSFFSPEPITMANARYVSP-DTKYEQLDNKLPPPSNQTDQDFKEELEEFFKNVSSQ
>tr|A0A0A7UZR7|A0A0A7UZR7_9BETC Spike glycoprotein OS=Betacoronavirus HKU24 GN=S PE=4 SV=1
-----RLTNF-EPFVPSVESVGGLYEIQIPTEFTIGNLEEFVQTTSPKVTIDCAAFVCGDYAACREQLVEYGSFCDNINTILNEVNSMIDTSQYQLASTL
MNGVTLSRLFNQDDINFSSVMGCVS---HRSAIEDILFNKVKLSDVGFVDAYNNCTQGSEIRDLVCVQSFNGIKVLPPVLSESQMSGYATGVGLSMLFPP
FSA----AAGVPFTMSVQYRINGLGVTMDVLNQNQKMIANAFNNALTAIQNGFDATNSALAKIQSVVNANAEALNNLLQQLSNRFGAISSSLQEILSRLD
ALEAQVQIDRLINGRLTALNAYVSQQLSDITLVKFSASQAIEKVNECVKSQSTRVNFCGNGNHILSLVQNAPYGLYFIHFSYQPTKYTTAYVSPGLCLAD
VGVAPKSGYFIKVNDKWMFTGSAYYHPEPITNDNVIMMNNCAVNFTKAPDVVLNTSIPNLPDFKEELDKWFKNQSSV
>sp|P15777|SPIKE_CVBM Spike glycoprotein OS=Bovine coronavirus (strain Mebus) GN=S PE=3 SV=1
-----RFTTF-EPFTVSLEPVGGLYEIQIPSEFTIGNMEEFIQTSSPKVTIDCSAFVCGDYAACKSQLVEYGSFCDNINAILTEVNELLDTTQLQVANSL
MNGVTLSKLFNVDDINFSPVLGCLKV-SSRSAIEDLLFSKVKLSDVGFVEAYNNCTGGAEIRDLICVQSYNGIKVLPPLLSVNQISGYTLAATSASLFPP
LSA----AVGVPFYLNVQYRINGIGVTMDVLSQNQKLIANAFNNALDAIQEGFDATNSALVKIQAVVNANAEALNNLLQQLSNRFGAISSSLQEILSRLD
ALEAQAQIDRLINGRLTALNVYVSQQLSDSTLVKFSAAQAMEKVNECVKSQSSRINFCGNGNHIISLVQNAPYGLYFIHFSYVPTKYVTAKVSPGLCIAD
RGIAPKSGYFVNVNNTWMFTGSGYYYPEPITGNNVVVMSTCAVNYTKAPDVMLNISTPNLHDFKEELDQWFKNQTSV
>tr|Q19U39|Q19U39_CVHK1 Spike glycoprotein OS=Human coronavirus HKU1 GN=S PE=4 SV=1
-----RFVTF-EPFNVSVETVGGLFEIQIPTNFTIAGHEEFIQTSSPKVTIDCAAFVCSNYAACHDLLSEYGTFCDNINSILNEVNDLLDITQLQVANAL
MQGVTLSNLSDVDNIDFKSLLGCLSS--SRSLLEDLLFNKVKLSDVGFVEAYNNCTGGSEIRDLLCVQSFNGIKVLPPILSETQISGYTTAATVAAMFPP
WSA----AAGVPFSLNVQYRINGLGVTMDVLNKNQKLIANAFNKALLSIQNGFTATNSALAKIQSVVNANAQALNSLLQQLFNKFGAISSSLQEILSRLD
NLEAQVQIDRLINGRLTALNAYVSQQLSDITLIKAGASRAIEKVNECVKSQSPRINFCGNGNHILSLVQNAPYGLLFIHFSYKPTSFKTVLVSPGLCLSD
RGIAPKQGYFIKQNDSWMFTGSSYYYPEPISDKNVVFMNSCSVNFTKAPFIYLNNSIPNLSDFEAELSLWFKNHTSI
>tr|A0A023VZD9|A0A023VZD9_9BETC S protein OS=Middle East respiratory syndrome coronavirus PE=4 SV=1
-----RLAAFNHPIQV-DQLNSSYFKLSIPTNFSFGVTQEYIQTTIQKVTVDCKQYVCNGFQKCEQLLREYGQFCSKINQALHGANLRQDDSVRNLFASV
KSSQSS-PIGFGGDFNLTLLEPVSS-RSARSAIEDLLFDKVTIADPGYMQGYDDCMGPASARDLICAQYVAGYKVLPPLMDVNMEAAYTSSLLGSIAGVG
WTAGLSSFAAIPFAQSIFYRLNGVGITQQVLSENQKLIANKFNQALGAMQTGFTTTNEAFRKVQDAVNNNAQALSKLASELSNTFGAISASIGDIIQRLD
VLEQDAQIDRLINGRLTTLNAFVAQQLVRSESAALSAQLAKDKVNECVKAQSKRSGFCGQGTHIVSFVVNAPNGLYFMHVGYYPSNHIEVVSAYGLCDAT
NCIAPVNGYFIKTNDEWSYTGSSFYSPEPITSLNTKYVAP-QVTYQNISTNLPPPGNSTGIDFQDELDEFFKNVSTS
>tr|Q19U49|Q19U49_CVHK1 Spike glycoprotein OS=Human coronavirus HKU1 GN=S PE=4 SV=1
-----RFVTF-EPFNVSIESVGGLYEIKIPTNFTIVGQEEFIQTNSPKVTIDCSLFVCSNYAACHDLLSEYGTFCDNINSILDEVNGLLDTTQLHVADTL
MQGVTLSNLFDVDNINFKSLVGCLSS--SRSFFEDLLFDKVKLSDVGFVEAYNNCTGGSEIRDLLCVQSFNGIKVLPPILSESQISGYTTAATVAAMFPP
WSA----AAGIPFSLNVQYRINGLGVTMDVLNKNQKLIATAFNNALLSIQNGFSATNSALAKIQSVVNSNAQALNSLLQQLFNKFGAISSSLQEILSRLD
ALEAQVQIDRLINGRLTALNAYVSQQLSDISLVKFGAALAMEKVNECVKSQSPRINFCGNGNHILSLVQNAPYGLLFMHFSYKPISFKTVLVSPGLCISD
VGIAPKQGYFIKHNDHWMFTGSSYYYPEPISDKNVVFMNTCSVNFTKAPLVYLNHSVPKLSDFESELSHWFKNQTSI
>tr|S4WYE8|S4WYE8_BCHK5 Spike glycoprotein OS=Bat coronavirus HKU5 PE=4 SV=1
-----QIANFTSPLTL-APINSTGFVVAVPTNFTFGVTQEFIETTIQKITVDCKHYVCNGFKKCEDLLKEYGQFCSKINQALHGANLRQDESIANLFSSI
KTQNTQ-PLGLNGDFNLTMLQIPQE-RKYRSAIEDLLFNKVTIADPGYMQGYDECMGPQSARDLICAQYVAGYKVLPPLYDPYMEAAYTSSLLGSIAGAS
WTAGLSSFAAIPFAQSIFYRLNGVGITQQVLSENQKIIANKFNQALGAMQTGFTTTNLAFNKVQDAVNANAMALSKLAAELSNTFGAISSSISDILARLD
TVEQEAQIDRLINGRLTSLNAFVAQQLVRTEAAARSAQLAQDKVNECVKSQSKRNGFCGTGTHIVSFAVNAPNGLYFFHVGYQPTSHVNATAAYGLCNTP
KCIAPIDGYFVLNQQQWYYTGSSFFHPEPVTEANSKYVSM-DVKFVNLTNRLPPPSNSTDLDFKDELEEFFKNVSSQ
>tr|A0A096XNG8|A0A096XNG8_9BETC Spike protein OS=Longquan Rl rat coronavirus PE=4 SV=1
-----RFTTF-EPYNVSVEAVGGLYEIQIPINFTIGSHEEFIQTSSPKVTIDCAAFVCSDYAACRQQLVEYGTFCDNINTILSEVNGLLDNTQLQVANSL
MQGVTLSTLLDVDDINFNPVMGCLSS--YRSTIEDLLFNKVKIADVGFVEAYNNCTGGNELRDLICVQSFNGIKVLPPVLSESQISGYTTAATAASIFPP
WSA----AAGVPFSLSVQYRINGLGVTMDVLSENQKLIANAFNNALGAIQNGFDATNSALAKIQNVVNANAEALNNLLLQLSNRFGAISASLQEILSRLD
ALEAQVQIDRLINGRLTALNAYVSQQLSDITLVKFSASQAIEKVNECVKSQSPRINFCGNGNHILSLVQNAPYGLYFIHFSYVPIAFKTAYVSPGLCIAD
RGLAPKAGYFVKENGQWLFTGSSYYYPEPITDKNSVVMSTCAVNYTKAPDVFLNNSIPNLPDFKEELDQWFKNQTSI
>tr|Q2XV37|Q2XV37_9GAMC Spike glycoprotein S2 subunit (Fragment) OS=Infectious bronchitis virus GN=S PE=2 SV=1
------------------------------------------------------QYVCGNSLDCRKLFQQYGPVCDNILSIVNSVGQKEDMELLSFYSST
K-------PISTGDFNI---LTPSSSPRGRSFIEDLLFTSVETVGLPT-AEYKKCTAGGTLKDLVCAREYNGLLVLPPIITADMQTMYTASLVASMAFGG
IT----AAGAIPFATQIQARINHLGITQSLLLKNQEKIAASFNKAIGHMQEGFRSTSLALQQVQDVVNKQSAILTETMTSVNKNFGAISSVIQDIYAQLD
VIQADAQVDRRITGRLSSLSVLASAKQSEYIKVSQQRELATQKINECVKSQSNRYGFCGSGRHVLSIPQNAPNGIVFIHFSYTPESFVNVTAIVGFCVQP
ANASQARGIFIQVNGIYYITARDMYMPRDITAGDIVTLTSCQANYVNVNKTVITTFVEDDFDFSKW-----WNDTK-
>tr|Q5EM29|Q5EM29_9ALPC Spike protein (Fragment) OS=Miniopterus bat coronavirus 1 PE=4 SV=1
-------------------------------------------------------------PRCLQLLTQYASVCRNVEEPLQLNARLEALELTSMIVVQ
ERTLDLGIA-----------LALPRQRQSRSAIEDLLFTKVITSGLGTVEDYKACAERNTIAEAGCVQYYNGIAVLPGVVDPSLLAQYTAALTGGMVLGG
VT----AAAAIPFSLAVQSRLNYLALQTDVLQRNQKILAQSFNAAMGNITSSLTTISRALNKVENVVNEQGTALSQLTKQLASNFQAISSSIEDLYNRLD
RLEADQQVDRLITGRLAALNAFVTQQLLRYSEVRASRQLAQEKINECVKSQSSRYGFCGNGTHVFSVANAAPDGIMFLHANLVPTAFIQVSAFAGVCVNG
RA-LVRKP----DTNQYLITPRLLFEPRVPVSADFVEVSNCNVTFVNLTVNELPELLPDYIDVKEFAA-TIPNRTE-
>tr|Q1HVK7|Q1HVK7_CVH22 Spike glycoprotein (Fragment) OS=Human coronavirus 229E GN=S PE=4 SV=1
------------------------------------------------------TYVCNGNVRCVELLKQYTSACKTIEDALRNSAMLESADVSEMLTFD
KKAFTLANVSS--------VPRSGSRVAGRSAIEDILFSKLVTSGLGTVADYKKCTKGLSIADLACAQYYNGIMVLPGVADAERMAMYTGSLIGGIALGG
LT----SAASIPFSLAIQSRLNYVALQTDVLQENQKILAASFNKAMTNIVQALQTVATALNKIQDVVNQQGNSLNHLTSQLRQNFQAISSSIQAIYDRLD
IIQADQQVDRLITGRLAALNVFVSHTLTKYTEVRASRQLAQQKVNECVKSQSKRYGFCGNGTHIFSLVNAAPEGLVFLHTVLLPTQYKDVEAWSGLCVDG
RNGYVREG------NYYRITSRIMFEPRIPTIADFVQIENCNVTFVNISRSELQTIVPEYIDVQELSY-KLPNYTV-
>tr|I2EBL8|I2EBL8_9ALPC Spike glycoprotein S2 (Fragment) OS=Porcine epidemic diarrhea virus GN=S PE=4 SV=1
------------------------------------------------------TYVCNGNSRCKQLLTQYTAACKTIESALQLSARLESVEVNSMLTIS
EEALQLATITNVL-----GVPASGRVVQKGSFIEDLLFNKVVTNGLGTVEDYKRCSNGRSVADLVCAQYYSGVMVLPGVVDAEKLHMYSASLIGGMALGG
LT----TAAALPFSHAVQARLNYLALQTDVLQRNQQLLAESFNSAIGNITNGLNTVAHALTKVQEVVNSQGSALTQLTIQLQHNFQAISSSIDDIYSRLD
ILSADVQVDRLITGRLSALNAFVAQTLTKYTEVQASRKLAQQKVNECVKSQSQRYGFCGDGEHIFSLVQAAPQGLLFLHTVLVPGDFVNVIAIDGLCVNG
DIALTRHELQTYTATEYLVSSRRMFEPRKPTVSDFVQIESCVVTYVNLTSDQLPDVIPDYIDVDEILA-SLPNRIG-
>tr|B8YDG2|B8YDG2_9GAMC S2 glycoprotein (Fragment) OS=Infectious bronchitis virus GN=S2 PE=4 SV=1
------------------------------------------------------QYVCGNSLECRKLFQQYGPVCDNILSVVNSVGQKEDMELLSFYSST
K-------PLTTGAFNV---LPQPNSPKGRSFIEDLLFTSVETVGLPT-AKYKKCTAGGTLKDLICAPGFNGLLVVPPINTADMPTIFSPSLISAMPLGG
IT----AAGAIPFSLQIPPKINHSGIPQSFLIKNQKKIAAPFNKPMGHPQVDYRSTSLALQQIQDVVNKQSAILTETMPSLNKNLGAISSVIQDIYQQLD
AIQANAQVDRLITGRLSSLSVLASAKQSEYFKVSQQRELAIQKINECVKSQSTRYSFWGNGRHVLTIPQNAPNGIVLIHFSYTPESCVNVTAIVGFRGKP
ANAKQARGIFIQVNGSYYITARDMFMPRAITAGDIVTLTSCQVNYVSVNKTVITTFVDNDFDFSKW-----WNDTK-
>tr|B8YDG3|B8YDG3_9GAMC S2 glycoprotein (Fragment) OS=Infectious bronchitis virus GN=S2 PE=4 SV=1
------------------------------------------------------QYVCGNSLDCRKLFQQYGPVCDNILSVVNSVGQKEDMELLSFYSST
K-------PLTTGAFNV---LPQPSSPRGRSFVEDLLFTSVETVGLPT-AEYKKCTAGGTLKDLICAREYNGLLVLPPIITADMQTMYTASLIGAMAFGG
IT----SAAAIPFATQIQARINHLGITQSLLMKNQEKIAASFNKAMGQMQEGFKSTSLAFQQIQDVVNKQSAILTETMASLNKNFGAISSVIQDIYQQLD
SIQADAQVDRLITGRLSSLSVLASAKQSEYIRVSQQRELATQKINECVKSQSIRYSFCGNGRHVLTIPQNAPNGMGFIHLTYTPDSFYNVTAIVGFCVKP
ANASQARGIFIQVNGTYYITSRDMYMPRDITSGDIVTLTSCQANYVSVNKTVITTFVENDFDFSKW-----WNETK-
>tr|Q66196|Q66196_9GAMC Peplomeric polyprotein (Fragment) OS=Infectious bronchitis virus PE=4 SV=1
------------------------------------------------------QYVCGNSFQCKQLFQQYGSVCDSIHSIVNGLAQQDNAEMIQFYSST
K-------PFSAGDFNI---LPKNGQPTGRSFIEDLLFDKVESLGLPG-SAYQKCTSGGFVKDLVCAQKYNGLLVLPPIITAEMQAMXTISLVASMAFGG
IT----SAGAIPFATQLQARINHLGITQTVLQKNQEKIAASFNKAMKNVQEGFSATSLALKQVQDVVNEQGAILQQTMHSLNKNFGAISHVIQDIYKQLD
ALEANAQVDRLITGRLSSLSVLASAKQLEYAKVTQQRELAKEKINECVKSQSTRYGFCGGGMHIMSIPQNAPNGMVXLHFTYTPESYVNVTAVVGFCVKS
DNDTEGRGIFVEVNGTYYITSRDMYNPRAITGGDVVKLTSCQANYQSINRTVITTFVDEDFDFSKW-----WNETS-
>tr|Q9WCG2|Q9WCG2_9GAMC Spike glycoprotein (Fragment) OS=Infectious bronchitis virus PE=4 SV=1
------------------------------------------------------QYVCGNSLACKKLFQQYGPVCDNILSVVNSVGQKEDMEFLTFYSST
K-------PLSTGEFNI---LTTPSSPRGRSFIEDLLFTSVESVGLPT-EAYKKCTAGGFLKDLACAREYNGLLVLPPIITAEMQTLYTSSLVASMAFGG
IT----SAGAIPFATQLQARINHLGITQSLLLKNQEKIAASFNKAIGHMREGFRSTSLALQQIQDVVNKQSAILTETMLALNKNFGAISSVIQDIYQQLD
DIQADAQVDRIITGRLSSLSVLASAKQSEYIRVSQQRELATQKINECVKSQSIRYSFCGNGRHVLTIPQSAPNGIVFIHFTYTPESFINVTAVVGFCVSP
ANASQGRGIFIQVNGSYYITARDMYMPRDITAGDIVTLISCQANYVSVNKTVITTFVDNEFDFSKW-----WNETK-
>tr|A0A077EVE4|A0A077EVE4_9ALPC S protein (Fragment) OS=Feline coronavirus PE=4 SV=1
------------------------------------------------------KYVCNGNRHCLTLLTQYTSACQTIENALNLGARLESLMLNEMITVS
DRSLELATVEKLGGFYFDGL---PPRIGKRSAIEDLLFNKVVTSGLGTVDDYKKCSAGTDVADLACAQYYNGIMVLPGVVDQNKMAMYTASLIGGMALGS
IT----SAVAVPFAMQVQARLNYVALQTDVLQENQKILANAFNNAIGNITYGFNTMASALTKIQSVVNQQGEALSQLTSQLQKNFQAISSSIAEIYNRLE
KVETDAQVDRLITGRLAALNSYVSQTLTQYAEVKASRQLAMEKVNECVKSQSNRYGFCGNGTHLFSLVNSAPDGLLFFHTVLLPTEWEEVTAWSGICVND
TYAYVKYN------GTYMVTPRNMFQPRKPQMSDLVQIASCEVTFLNATYVNFQDIVIDYIDIADMLEQHNPNYTI-
>tr|E5D089|E5D089_9GAMC Spike OS=Infectious bronchitis virus PE=4 SV=1
-------------------------YVLIPNSFNLTVTDEFIQTQFQKIQINCIQYVCGSSIQCKQLFQQYGSVCDSILSIVNGIALQDNAEMLHFYSST
PRGFDTNSFFTAGEFNISLVLPKNGQPTGRSFIEDLLFDKVESLGLPGDSAYQKCTSGPFVKDLVCAQNYNGLLVLPPIITAEMQAMYTSSLVASMAFGG
IT----SAGAIPFATQIQARINHLGITQTVLQKNQEKIAASFNKAMKHMQDGFSATSLALQQVQDVVNEQGAILQQTMHSLNKNFGAISHVIQDIYKQLD
ALEANAQVDRIITGRLSSLSVLASAKQLEYTKVSQQRELAKEKINECVKSQSNRHGFCGEGMHIMSIPQNAPNGIVFLHFTYTPETYANVTAVVGFCVKP
GNLVPGRGIFIEVNGTYYITGRDMYSPRAITAGDVVKLTSCQANYQSINRTVITTVDEDDFDFDHELSKWWNET---
>tr|A0A0D3MDM8|A0A0D3MDM8_9GAMC Spike (S) glycoprotein OS=Infectious bronchitis virus GN=IBVgp2 PE=4 SV=1
-------------------------NVLIPNSFNLTVTDEYIQTRMDKVQINCMQYVCGNSLECRNLFQQYGPVCDNILSIVNSVGQKEDMELLYFYSST
PAGFNTPVLVSTGDFNISLLLTPHSNPSGRSFIEDLLFTSVESVGLPTDDAYKKCTAGPFLKDLACAREYNGLLVLPPIITAEMQTLYTSSLVASMALGG
IT----AAGAIPFATQLQARINHLGITQSLLLKNQEKIAASFNKAIGHMQEGFKSTSLALQQIQDVVNKQSAILTETMQSLNKNFGAISSVIQDIYQQLD
AIQADAQVDRLITGRLSSLSVLASAKQAEYLKVSQQRELATQKINECVKSQSTRYSFCGNGRHVLTIPQNAPNGIVFIHFTYTPESFVNVTAIVGFCVNP
ANIVPGRGIFIQVNGTYYITARDMYMPRSITAGDIVTLTSCQANYVNVNKTVITTVDEDDFDFNDELSKWWNET---
>tr|G8FQA5|G8FQA5_9GAMC Spike glycoprotein OS=Infectious bronchitis virus GN=S PE=4 SV=1
-------------------------SVLIPNSFNLTVTDEYIQTRMDKVQINCLQYVCGNSLECRKLFQQYGPVCDNILSVVNSVSQKEDMELLSFYSST
PKGYDTPVLVSTGEFNISLLLKPPSSPSGRSFIEDLLFTSVETVGLPTDAEYKKCTAGPTLKDLICAREYNGLLVLPPIITADMQTMYTASLVGAMAFGG
IT----SAAAIPFATQIQARINHRGITQSLLMKNQEKIAASFNNAIGHMQEGFRNTSLGFQPIQDVVNKQSAILTETMNSLNKNFGAITSVIQDIYAQLD
AIQADAQVDRLITGRLSSLSVLASAKQSEYIRVSQQRELATQKINECVKSQSNRYGFCGSGRHVLSIPQNAPNGIVFIHFTYTPESFVNVTAIVGFCVKL
ANIVPGRGIFIQVNGTYYITARDMYMPRDITAGDIVTLTSCQANYVNVNKTVITTVEDDDFDFDDELSKWWNDT---
>tr|A0A0F6YS09|A0A0F6YS09_9GAMC Spike protein OS=Duck coronavirus GN=S PE=4 SV=1
-------------------------NVSIPYTLTLAVTTEYLQTSYQKVTIDCARYVCGESLKCRTLLQQYGSFCTSVNNILAGVNDNEDNGMLSFVEAI
FSSF---NSLG-G-FNLSLVLPN---SAGRSFIEDLLFDKVVTVGVGEDANYDKCMDSRNAADLTCAQFYNGIMVLPGVVDPDLMTLYTGSLLGGMSFGG
LS----SAASIPFATQVQARINYLALTQSVLLDNQNLIANSFNNALEKIQSAFETVSVALSKVQDVVNSHSEILNKLMAQLNVNFGAISSSLSDIYSQLD
ELNANAQVDRLITGRLTALSTYAASLQLAAYKAEESRKLALQKVEECVKSQSMRYGFCGNGSHVLTIPQTAPNGMFFIHYTYPPASYITVEAVPGLCVTT
RTVMPGSGIIFRANGTFFVTARTLYQPKLLSYSDVVNLTSCEANYYNVSQDETP--QPELPSFDDEFDNIYTEL---
>tr|G8FQ96|G8FQ96_9GAMC Spike glycoprotein OS=Infectious bronchitis virus GN=S PE=4 SV=1
-------------------------NVLIPNSFNLTVTDEYIQTRMDKVQINCLQYVCGNSLDCRHLFQQYGPVCDNILSVVNSIGQKEDMELLNFYSST
PSVFYTPFLVSTGEFNISLLLTTPSSPRRRSFIEDLLFTSVESVGLPTDDAYKNCTAGPFLKDLACAREYNGLLVLPPIITTKMQKLENSSLVASMAFGG
IT----AAGAIPFATQLQARINHLGITQSLLLKNQEKIAASFNKAIGHMQDGFRSTSLALQQIQDVVNKQSAILTETMASLNNNFGAKSSMIQEIYQQLD
AIQANAQVDRLITGRLSSLSVLASAKQAEYIRVSQQRELATQKINECVKSQSIRYSFCGNGRHVLTIPQNAPNCIVFIHFSYSSDSFFNVSAIVGFLVKP
ANIVPGRGIFIQVNGSYYITARDMYMPRAITAGDIVTLTSCQVNYVSVNKTVITTVDNDDFDFNDELSKWWNDT---
>tr|G8FQ97|G8FQ97_9GAMC Spike glycoprotein OS=Infectious bronchitis virus GN=S PE=4 SV=1
-------------------------NVLIPDSFNLTVTDEYIQTRMDKVQINCLQYVCGNSIECRKLFQQYGPVCDNILSVEHGVGQREDMELLSFYSST
PSGYNTPIFDMTADHKLSLLLTPPNSPTGRSFIEDLLFTSVESVGLPTDEEYKKCTAGPFVKDLVCAREYNGLLVLPPIITADMQTMYTSSLVASMALGG
IT----AAGAIPFATQLQARINHLGITNSLLLKNQEKIAASFNKAIGHMQEGLISTSLALQQIQDVVNKQSAILTETMASLNNNFGAKSSMIQEIYQQLD
AIQADAQVDRLITGRLFSLSVLASAKQAEYHRVSQQRELATQKINECVKSQSNRYSFCGNGRHVLTIPQNAPNGIVFIHFTYTPESFVNVTAIVGFCVNP
ANIVPNRGIFIQVNGSYYITARDMYMPRDITAGDIVTLTSCQANYVSVNKTVITTVDNDDFDLNDELSKWWNDT---
>tr|Q7T833|Q7T833_9GAMC Spike protein OS=Infectious bronchitis virus PE=4 SV=1
-------------------------HVLIPTGFNLTVTDEYIQTRMDKVQINCLQYICGNSLECRKLFQQYGPVCDNILSVVNSVSQKEDMELLNFYSST
PSGYNSPVFLTTGEFNISLVLTQPSSPSGRSFVEDLLFTSVETVGLPTDAEYKKCTAGPALKDLVCAREYNGLLMLPPIITADMQTMYTASLVASMAFGG
IT----AAGAIPFATQIQARINHLGITQSLLLKNQEKIAASFNKAIVHMQEGFRSTSLALQQIQDVVNKQSAIPAEALVALNKNFGAISSVMQDIYQQLD
AIQADAQVDRLITGRLSSLSVLAAAKQSEYLKVSQQRELATQKINECVKSQSTRYSFCGNGRHVLTIPQNAPNGIVFIHFTYTPESFVNVTAIVGFCVNP
TNIVPGRGIFISVNGTYYITARDMYMPRNITSGDIVTLTSCQANYVSVNKTVVTTVDNDDFDFDDELSKWWNDT---
>tr|A0A023VUV5|A0A023VUV5_9GAMC Spike glycoprotein OS=Infectious bronchitis virus GN=S PE=4 SV=1
-------------------------NVLIPISFNLTVTDEYIQTQMIKVQINCAQYVCGNSFECKKLFIQYGPVCDNILNIVNSLAQQDNMEMLSFYAST
PIGFDSPVLFTTGDFNLSSFFRPSSKPTRRSFVEDLLFTKVESLGLPGDTAYQKCTAGPFFKDLVCAQHYNGLLVLPPIITAEMQTMYTASLIASMAFGG
IT----SAGAIPFATQIQARINHLGITQTVLQKNQEQIAKSFNRAMTHMQDGFRATSSALREIQDVVNKHSEVINQAMSSLNKNFGAITSVIQDIYSRLD
IIEANAQVDRLINGRLSSLSVLAAAKQAEYAKVSQQRELAKQKINECVKSQSYRYGLCGASRHVITISQSAPNGIVLLHFTYTPDTFKNVTAVVGFCVRP
ENVVPGRGIIMWEIGMYFITSRDVFMTRVNSGGDVVRVTSCQASYETVNKTVVTTVENDDFDFHHELCKWWNGS---
>tr|F6M7B5|F6M7B5_9GAMC Spike protein OS=Infectious bronchitis virus GN=S PE=4 SV=1
-------------------------FVLIPDTFNLTVTDEYIQTFMEKIQINCIQYVCGNSIECKKLFQQYGPVCDNILNIVYSLAQQDNMEFLQFYSAT
PKGFDTIIFVSTDGFNLSLVLRQPSSPRGRSFIEDLLFTKVESLGLPGDTAYQKCTAGPFVKDLVCAQHYNGLLVLPPIITAEMQTMYTASLVASMAFGG
IT----SAGAIPFATQIQARINHLGITQTVLQKNQEKIAASFNKAMAHMQDGFRATSLALQQIQDVLNRQGSVLQDAMNSLNKNFGAISSVIQDIYSRLD
TLEANTQVDRLISGRLSSLSVLASAKQAEYAKVSQQRELAKQKINECVKSQSSRLGFCGAGRHVLTIPQNAPNGILLLHFTYTPETFKNVTAVVGFCVKP
ENIVPGRGIFIQVNGTYYITARDMYMPRSITAGDIVTLTSCQANYVNVNKTVITTVDEDDFDFNDELSKWWNET---
>tr|A4ZCU8|A4ZCU8_9GAMC Spike protein OS=Infectious bronchitis virus GN=S PE=4 SV=1
-------------------------NVLIPDSFNLTVTDEYIQTSMEKIQINCIQYVCGNSLECKKLFQQYGPVCDNILSIVNSIAQQDNMEFLQFYSAT
PKEFDKPILVSTDGFNLTLVLMQPSSSKKRSFIEDLLFTKVESLGLPGDTAYKNCTSGPFVKDLICAQNYNGLLVLPPIITAEMQTMYTASLVASMAFGG
IT----SAGAIPFATQIQARVNHLGITQTVLQKNQEQIAASFNKAMAHMQNGFRATSSALQQIQDVINKQGSILQDAMNSLNKNFGAVSSIIQDIYSRLD
AIEANVQVDRLITGRLSSLSVLASAKQAEYAKVSQQRELAKQKINECVKSQSTRLGFCGAGRHVLTIPQNAPNGIVLLHFTYTPETYKNVTAVVGFCIKP
ANIVPGRGVFIQENGTYYITARDMYMPRAITGGDVVTLTSCQANYVSLNKTVITTVENDDFNFHDELSKWWNET---
>tr|A0A0N6YPZ1|A0A0N6YPZ1_CVTKE Spike glycoprotein OS=Turkey enteric coronavirus GN=S PE=4 SV=1
-------------------------NVSIPKELTLAVTTEYLQTRYQKVTIDCAKYVCGDSTRCRTLLQQYGSFCQSVNAILSGVNENEDNGLLQYAEAI
FTGY---NVLG-G-FDLSLVLPKNLTLAGRSTIEDLLFDKVVTLGVSEDQNYDKCIASRNLADLTCAQFYNGVMVLPGVVDPGLMAVYTGSLIGGMALGG
IT----AAASIPFATQLQARVNYLALTQSVLLDNQNLIANSFNKALKGIQSAFESVTVALNKVQDVVNTHSDILNKLMAQLSVNFGAVSSSLNEIYLKLD
QINADAQVDRLITGRLTALSTYVASLQLAAYKADQSRRLALQKVEECVKSQSMRYGFCGNGSHVLTIPQSAPNGIFFIHYTYQPTSYIIIEAVPGLCVTT
PSVMPGSGIIFRQNGTFFVTSTQLYEPKLLSYSEVVNLTSCEANYYDVSESETP--QPALPNFDDEFNDIFTEL---
>tr|U4DCU7|U4DCU7_9GAMC S OS=Guinea fowl coronavirus GfCoV/FR/2011 GN=S PE=4 SV=1
-------------------------NVSIPQKLTLAVTTEYLQTRYQKVTIDCAKYVCGDSVRCRTLLQQYGSFCQSVNGILSGVNDNEDNGLLQFAEAI
FTGY---NTLN-G-FDLDLVLPKNLSKPGRSVIEDLLFDKVVTLGVSEDKNYDKCIASRNLADLTCAQFYNGVMVLPGVVDPGLMAAYTGSLIGGMALGG
IT----SAAAIPFATQIQARVNYLALTQSVLLDNQNLIANSFNKALKGIQSAFESVTVALNKVRDVVNTHSDILNKLMAXLSVNFGAVSSSLNEIYLKLD
QLNADVQVDRVITGRLTALSTYVSSLQLAAYKADQSRRLALQKVEECVKSQSTRYGFCGNGSHVLTIPQNAPNGMFFIHYTYQPVTFVTVEAVPGLCIST
STVMPGSGIIFRENGTFYVTSAQLFEPKLLSYSEVVNLTSCQPNYYNVSESETP--QPALPNFDEEFSGIYTEL---
>tr|E6YDV6|E6YDV6_CVTKE Putative spike glycoprotein OS=Turkey enteric coronavirus GN=S PE=4 SV=1
-------------------------NVSVPLELTLAVTTEYLQTQYQKVVIDCARYVCGESLKCRTLLQQYGSFCSSVNSILAGVNTLEDDGLLTFVEVL
FQNYTAHNMLG-G-FDLSLVLPN-ITSGGRSAIEDLLFNKVTTLGFNEERGYDKCMDSRNAADLTCAQYYNGVLVLPGVVDPTLMGLYTTSLLGGMAFGG
IT----AAAAIPFATQVQARINYLALTQSVLMDNQNLIANSFNKALKNIQSAFESVSMALTKIQDVVNTHSDILNKLMAQLNVNFGAISSSLQDIYAQLG
DLSANAQVDRLITGRLTALSTYVTSLQLAAYKAEQSRRLAMQKIEECVKSQSLRYGFCGNGSHVLTIPQSAPNGIFFIHYTYQPVTFRSVLAVPGLCVKS
NTLMPGAGIIFLENGTFYVTSRTLYQPKVLSYSDVVNLTSCEPNYYNVNQSDTP--QPELPNFDEEFEGIYTEL---
>tr|H9BR08|H9BR08_9NIDO Spike glycoprotein OS=Magpie-robin coronavirus HKU18 GN=S PE=4 SV=1
-------------------------NISIPKNFTVSIQTEYIQIEQQPVVVDCRQYVCNGNPRCLQLLQQYTSACSTIEQALSLNARLEASSIQDLLTYS
PETLVLANIFD-SGYNLSSLLPKEL--YGKSAIEDLLFNKVVTNGLGTDQDYKACTNGMSIADLVCAQYYNGIMVLPGVAGPEKMAQYTASLTGAMVFGG
IT----AASAIPFSLAVQSRLNYVALQTDVLQQNQQLLADSFNNAIGNITLAVATVANALTKVQTVVNEQGHALATLTQQLANNFQAISASISDIYNRLN
QLEADAQVDRLITGRLASLNAFVTQTLSKLAEVRQQRQLATDKVNECVKSQSPRYGFCGNGTHLFSIVNAAPQGLLFFHTVLLPTQYAYVQAFSGICYNG
IAALNTL-ALFKNGDKYLVSPRNMYQPRVPAQADFVYIETCTITYLNLTDLTID-VIPDYVDVNQTVNDILSKL---
>tr|B6VDX8|B6VDX8_THCOV Spike glycoprotein OS=Thrush coronavirus HKU12 (isolate Grey-backed thrush/Hong Kong/HKU12-600/2007) GN=S PE=4 SV=1
-------------------------NITIPLNFTISIQAEYLQIQAQHTVVDCQTYVCNGNAKCLQLLQQYSTACSNIEQSLTMSARLDNAETLAMVQTS
TQGYHLSKIHD-NQYNLTAILPNKQ--GGRSAIEDLLFDKVVTNGLGTDQDYKECTKGVSLADLACAQYYSGIMVLPGVVDAEKMAMYTASLTGGMFFGG
LT----AASSIPFSVAVQARLNYVALQTDVLQKNQQILANSFNQAMGNITLAIQTVANALNKIQDVVNKQGSALNHLTLQLQNNFDAISHSIADIYARLD
EVEANQQVDRLITGRLAALNAYVTQVLTQISQLKAQRQLAQEKINECVKSQSDRFGFCGNGSHLFSITQAAPNGILFLHTVLTPTDRVQVNAIAGICVSD
-SVLRNL-AFFQHDGKWLISPRRLFQPRPATVADFVQIQSCEVTFYNTTYDELP-LIPDYVDVNQTVSDILANK---
>tr|H9BR00|H9BR00_9NIDO Spike glycoprotein OS=Sparrow coronavirus HKU17 GN=S PE=4 SV=1
-------------------------NISIPINFTVSIQTEYIQIEHHPITVDCRKYVCNGNPRCLQLLLQYTSACSTIEQALALNARLEAASIQSMLTYN
PQTVKLANIFQ-SDYDLSSILPVST--GSRSAIEDLLFDKVVTNGLGTDQDYKKCTNGYSIADLVCAQYYNGIMVLPGVADPEKLAQYTASLTGAMVFGG
LT----SAAAIPFSLAVQSRLNYVALQTDVLQRNQQILATSFNNAMGNITQAVTTIANAFTKIQDVVNAQGTALSTLTTQLTNNFQAISASIADIYNRLN
QIEADAQVDRLITGRLAALNAFVTQTLAKLAEVRQSRQLALDKVNECVKSQSARYGFCGNGTHLFSFSNAAPYGLMFFHTVLLPTQYATVQAYSGICHQN
RATLRSL-ALFQKDDKYLITPRNMYQPRTATKADFVYIQSCDITFLNLTDTTIE-VIPDYVDVNKTIEEFLNNL---
>tr|H9BR25|H9BR25_9NIDO Spike glycoprotein OS=Wigeon coronavirus HKU20 GN=S PE=4 SV=1
-------------------------NISIPVNFTVAIQPEYLQVYTEQVVVDCATYVCNGNPLCNKLLLQYTSACDTIEQALQMSARLESSEVSNMLHIS
TQALDLANIFE-G-YNMSFVLPAVK--QGRSALEDLLFTKVVTAGLGTDADYEKCAKGMDIADLVCVQYYNGIMVLPGVANAGKMAEYTASLTGGMVMGG
IT----SAASIPFSLAVQSRLNYVALQTGVMLDNQKLLADSFNKAMETISGAVNTLSSALTKIQSVVNQHTTALNQLTQQLANNFQAISSSITDIYNRLG
QLEADAQVDRLITGRLAALNAFVSQTLTKAEQVRQSRLLAQQKVNECVKSQSQRFGFCGNGSHIFTIANAAPDGIMFLHTVLQPVSYITVVAYSGLCVDN
TYALKNL-ALVQYNG-YYVTPRNMYQPRPATTADFVQIQSCDVTLYNITYNNIS-VIPDFVDTNKTIEDIISSI---
>tr|B6VDY7|B6VDY7_9NIDO Spike glycoprotein OS=Munia coronavirus HKU13-3514 GN=S PE=4 SV=1
-------------------------EIDVPSAFALTVQSEYLQIQSEQVVIDCAQYVCNGNPRCLRLLSQYTSACSNIESALHASAQLDSRDITDMFQTS
TQSLELANIFQ-GDYNFTNILSNKI--GEKSVIEDLLFNKVVTNGLGTDQDYKACSKDMAIADLVCSQYYNGIMVLPGVVDAEKMAMYTGSLTGAMVFGG
LT----AAAAIPFSTGVQARLNYVALQTNVLQENQKILADSFNQAVGNISLALNTVANAINKIQTVVNQQGEALSHLTAQLSNNFQAISTSIQDIYNRLE
EVEANQQVDRLITGRLSALNAYVTQLLNQMSQIRQYRLLAQQKINECVKSQSTRYGFCGNGTHLFSLTQAAPNGILFMHAVLVPTKFARVTASAGICVDS
TKSLQQL-VLFNINGTWRVTPRNMYEPRIPRSADFVPLTECSVTYYNTTASQLP-IVPDFVDVNQTVSDIIGSL---
>tr|H9BQY5|H9BQY5_9NIDO Spike glycoprotein OS=Porcine coronavirus HKU15 GN=S PE=4 SV=1
-------------------------EVEIPSAFSLSVQTEYLQVQSEQVIVDCPQYVCNGNSRCLQLLAQYTSACSNIEAALHSSAQLDSREIINMFQTS
TQSLQLANIFK-GDYNFSSILTTRL--GGRSAIEDLLFNKVVTSGLGTDQDYKACSRDMAIADLVCSQYYNGIMVLPGVVDAEKMAMYTGSLTGAMVFGG
LT----AAAAIPFATAVQARLNYVALQTNVLQENQKILAESFNQAVGNISLALNTVAIAIKKIQTVVNQQGEALSHLTAQLSNNFQAISTSIQDIYNRLE
EVEANQQVDRLITGRLAALNAYVTQLLNQMSQVRQSRLLAQQKINECVKSQSSRYGFCGNGTHIFSLTQTAPNGIFFMHAVLVPNKFTRVNASAGICVDN
TRSLQQL-ILYQFNNSWRVTPRNMYEPRLPRQADFIQLTDCSVTFYNTTAANLP-IIPDVIDVNQTVSDIIDNL---
>tr|B6VDW9|B6VDW9_9NIDO Spike glycoprotein OS=Bulbul coronavirus HKU11-796 GN=S PE=4 SV=1
-------------------------EVEVPSAFTLSVQTEYLQVQSEQVVVDCARYVCNGNARCTRLLSQYTSACSNIESALHSSAQLDSREITNMFQTS
SQSLTLANIFQ-SDYNFTNIITSKA--GGRSAIEDLLFNKVVTNGLGTDQDYKACSKDLAIADLVCTQYYNGIMVLPGVVDAQKMAMYTASLTGAMVFGG
MT----AAAAIPFSTAVQARLNYVALQTNVLQENQKILAESFNSAVGNISLALLTVATAINKIQTVVNSQGEALSHLTAQLSNNFQAISTSIQDIYNRLD
EVQADQQVDRLITGRLAALNAYVTQLLNQMSQIRQSRLLAQQKINECVKSQSSRYGFCGNGTHLFSLTQSAPNGIFFMHAVLVPQQFTRVNASAGICVGG
TKSLQQL-ILYQYNNSWRVTPRNMYEPRVPRAADFIPLVDCSVTYYNATAEDLP-IIPDYVDVNQTVSDIINSL---
>tr|G3C7D2|G3C7D2_9GAMC Spike protein OS=Infectious bronchitis virus PE=4 SV=1
-------------------------NVLIPNSFNLTVTDEYIQTRMDKVQINCMQYVCGNSLECRKLFQQYGPVCDNILSVVNSVGQKEDMELLNFYSFT
PAGFNTPVFISTGDFNISLLLTPPSTLAGVLLLKMFYLQALNLLDYQQMTHTKSAHAGPFFKDLACAREYNGLLVLPPIITAEMQTLYTSSLVASMAFGG
IT----AAGAIPFATQLQARINHLGITQSLLLKNQEKIAASFNKAIGHMQEGFRSTSLALQQVQDVVNKQSAILTETMVSLNKNFGAISSVIQEIYQQLD
AIQANAQVDRLITGRLSSLSVLASAKQAEHIRVSQQRELATQKINECVKSQSSRYSFCGNGRHVLTIPQNAPNGIVFIHFTYTPESFVNVTAIVGFCVNP
ANIVPGRGIFIQLNGSYYITARDMYMPRDITAGDVVTLTSCQANYVSVNKTVITTVDNDDFDFNDELSKWWNDT---
>tr|H9BQZ2|H9BQZ2_9NIDO Spike glycoprotein OS=White-eye coronavirus HKU16 GN=S PE=4 SV=1
-------------------------EIEIPASFKLSVQTEYLQVQTEQVVIDCPKYVCNGNPRCLQLLAQYTSACSNIESALHSSAQLDSREITMMFQTS
SQSVELANIFQ-GDYNFSMILPTLP--GDRSAIEDLLFDKVVTNGLGTDQDYKSCSKGIAVADLVCAQYYNGIMVLPGVVDAEKMAMYTGSLTGAMVFGG
LT----AAAAIPFSTAVQARLNYVALQTNVLQENQKILAESFNQAVGNISLALLTVSNAINKIQTVVNQQGEALAHLTAQLSQNFQAISTSIQDIYNRLD
QIQADQQVDRLITGRLAALNAYVTQLLNKLSQVRQSRILAEQKINECVKSQSSRYGFCGNGTHLFSLTQAAPNGIFFMHAVLVPQTFQPVVAYAGICVDG
-YSLQQL-VLYNLNDSYRITPRNMFEPRTPTQSVFIPLTTCSVDFVNVTANNVS-IIPDYVDVNKTVSDIINGL---
>tr|H9BR35|H9BR35_9NIDO Spike glycoprotein OS=Common-moorhen coronavirus HKU21 GN=S PE=4 SV=1
-------------------------NISVPTNFTLSVQNEYFQIQSEQVVIDCGKYVCNGNYRCLQLLSQYTSACSNIESTLHGAIQLDSVEVSNLITTS
KSGFNLANIFQ-SDFNFTMLLADQP--RTFSAIEDLLFNKVVTNGLGTDQDYKKCSKGLAVADLACAQYYNGIMVLPGVVDAQKLAMYTASLTGGMVFGG
VT----AAAAVPFSTAVQARLNYVALQTNVLQENQKILAESFNSAISNISLAIVTMANAINKIQTVVNEQGEALSHLTIQLSNNFQAISSSIQDIYNRLS
IVEADQQVDRLITGRLAALNAYVTQLINQLSVIRQSRELANQKINECVKSQSQRYGFCGNGTHLFSITTAAPNGIMFMHAVLVPTAYQEVEAIAGICVNG
TKTLRML-ALYKYGGEYRITSRRMYEPRLPTMSDFIPIQSCIVQYINVTQEDLP-IIPDYVDVNSTVDSIINSI---
>tr|H9BR17|H9BR17_9NIDO Spike glycoprotein OS=Night-heron coronavirus HKU19 GN=S PE=4 SV=1
-------------------------NITIPKTFNISVQTEYIQISTDNIVIDCQRYVCNGNPRCLMLLSQYQSACSTIEQALHQKARLESLELSTMLAYS
PNTLQLANVFQ-SNFNLTNLLPQNNSPQKRSVIEDLLFSKVVTNGLGTDVDYKKCTKGLSIADLPCAQYYNGIMVLPGVADSGLLAAYTASLTGGMVFGG
LT----SAAAIPFATAVQARLNYVALQTDVLQRNQQILANAFNQAMGNITLAIRVVAGALDKIQQVVNSQGQALSKLTGELQRNFQAISASIEDIYNRLN
DIEADAQVDRLITGRLAALNAFLTQTLTQANEVKAARELALQKINECVKDQSKRYGFCGNGYHLFSIANAAPKGFIFFHTVLQPETTIEIQAIAGFCVSD
RQIARTQTIFLHENGTYMITPRKQYQPRTLAQADVVKISTCDVTYVNLTSIEFE-LIPEYVDINSTVEGILNST---
>tr|K4KCP3|K4KCP3_9ALPC Spike glycoprotein OS=Rousettus bat coronavirus HKU10 GN=S PE=4 SV=1
-------------------------NISIPLNFTISIQTEYIQMYSQQVSVDCSMYVCNGNVRCLRLLTQYATACRNIESALQLSARLESLEVSSVVSVS
ENALKLANIFD--SYNLSVLLPKSD---K-SVVEDILFDKVVTSGLGTDQDYKNCVGKLDIADVGCAQYYNGIMVLPGVVNEAKMGLYTASLTGAMVMGG
FT----AAAAIPFSLAVQSRLNYVALQTDVLQQNQKLLADSFNNALSNITLAINTVAVALGKVQGVVNEQGQAIAHLTQQLTQNFQAISHSIADIYNRLD
ELAADAQTDRLITGRLSALNAFVTQTLTKSAEVKQSRLLAQQKVNECVKSQSNRFGFCGNGTHLFSIVNNAPNGLMFFHTVLVPTVYVTVSAWAGVCFNN
-RILRES-VLFN-NN-YYVTNRKMYEPRVPQFSDFVQVENCVVSYLNLSDVDVN-VIPDYIDVNKTLEDLLQQL---
>tr|B1PHK2|B1PHK2_9ALPC Spike protein OS=Miniopterus bat coronavirus HKU8 GN=S PE=4 SV=1
-------------------------NISVPSNFTVSIQVEYLQMSIRPVSIDCAMYVCNGNPHCTRLLQQYISACRTIEEALQLSARLESFEVNSMLTVS
ETALDLVNIFG-GDYNLTALLPQGG---KRSVIEDILFDKVVTSGLGTDEDYKRCTNGIGIADVPCAQYYNGIMVLPGVVDEEKMSIYTASLLGGMTMGG
FT----PVAALPFALSVQSRLNYVALQTDVLQKNQQILANAFNSAIGNITVAIKTVASALNKVQSVVNSQGQALHQLTKQLASNFQAISASIEDIYNRLD
GLAADANVDRLITGRLAALNAFVTQTLTKYTEVRASRLLAQEKINECVKSQSTRYGFCGNGTHLFSIPNAAPEGIMLFHTVLVPTEYVSVTAWSGYCHNG
-VAVKGN-SLFQFNN-FYITPRNMYQPRTPTSADFIRISGCNVVYVNITDEQLP-VQPEFIDVNKTLEELMSRL---
>tr|A4ULL0|A4ULL0_9ALPC Spike protein (Fragment) OS=Bat coronavirus Fujian/773/2005 GN=S PE=4 SV=1
-------------------------NISIPSNFTISIQAEYLQIMSKPISVDCRMYVCNGNPHCLRLLVQYTSACSTLEQALQSHAKLESLEVNNMVTFS
PDAYRLANIFD--SYNLSTVLPSTY---ARSVIEDLLFEKVVTSGLGTDEDYKRCTNGLTIADTVCAQYYNGIMVLPGVVDAEKMAMYTASLTGAMVGGA
IT----AAASIPFSLAVQSRLNYVALQTDVLQQNQKILADSFNKAIEQITLGLSTVAEAISKIENVVNTQGLALSQLTQQLTANFDAISNSIEDIYNRLD
ILAADAQVDRLITGRLAALNSFVAQTLVKYAEVRSMRSLAMQKINECVKSQSARFGFCGNGTHLFSLSNAAPDGILFLHTVLVPTQYATVQAWSGICLGD
-FVLKAF-SLFNSTNTILVTSRTVYEPRRPTISEFIQIESCDVEQVNITHEMLP-VIPDYIDVNATLNEWFDKL---
>tr|F1DB20|F1DB20_9ALPC Spike protein OS=Chaerephon bat coronavirus/Kenya/KY22/2006 GN=S PE=4 SV=1
-------------------------NISIPTNFSISIQAEYVQVAVTPVSVDCSTYVCGGNPHCLRLLSQYVTACKTIEDALQLNARLESGELYTMLDVS
HDQMHLANIFG--PYNLSSVVGGVG---KRSFIEDLLFDKVVTNGLGTDTDYKSCTNGHDIADLACAQYYNGIMVLPGVADANKLSMYTASLLGGMALGG
IT----AAAATPFALAVQSRLNYVALQTDVLQKNQQILANSFNSAIGNITVAINTVASALNKVQSVVNQQGQALHQLTKQLSMNFQAISSSIEDIYMRLD
ALAADAQVDRLINGRLAALNAFVTQTLTSYAEVRASRRLAQDKINECVNSQSRRYGFCGNGTHLFTIPNAAPNGIMLLHTVLVPTAYKPVAAYAGFCVSD
-AVLKTL-SLFKIDA-YRVSSRHMYEPREPTFADFVRIAHCDISYVNITSDNVQ-VVPDYIDVNKTLEEFLQNH---
>tr|Q7TG53|Q7TG53_9BETC S glycoprotein (Fragment) OS=Murine hepatitis virus PE=2 SV=1
-----KLTTF-EPFTVSVESVGGLYEMQIPINFTIASHQEFIQTRSPKVTIDCAAFVCGDYAACRQQLIEYGSFCDNINAILGEVNNLIDTMQLQVASAL
IQGVTLSRLGQIDDINFSPLLGCLGSAQGRSTIEDLLFDKVKLSDVGFVEAYNNCTGGQEVRDLLCVQSFNGIKVLPPVLSENQISGYTAGATASSMFPP
WS----AAAGVPFSLSVQYRINGLGVTMNVLSENQKMIASAFNNAIGAIQEGFDATNSALAKIQSVVNANAEALNNLLNQLSNRFGAISASLQEILSRLD
ALEAQAQIDRLINGRLTALNAYVSKQLSDMTLIKVSAAQAIEKVNECVKSQSPRINFCGNGNHILSLVQNAPYGLYFIHFSYVPTSFTTVNVSPGLCISD
RGLAPKAGYFIQDNGEWMFTGSNYYYPEPINDKNSVVMSSCAVNYTKAPEVFLNTSIPNLPDFKEELDKWFKNQTSV
>sp|Q0Q466|SPIKE_BC512 Spike glycoprotein OS=Bat coronavirus 512/2005 GN=S PE=3 SV=1
------------------------GNISIPTNFTMSVRTEYIQLFNKPVSVDCAMYVCNGNDRCKQLLSQYTSACKNIESALQLSARLESMEVNSMLTVS
DEALKLATIFPGGGYNFTNILPANP--GARSVIEDILFDKVVTSGLGTDEDYKRCSNGLSIADLACAQHYNGIMVLPGVADWEKVHMYSASLVGGMTLGG
IT----SAAALPFSYAVQARLNYVALQTDVLQRNQQMLANSFNSAISNITLALNTVAEALSKVQDVVNGQGNALSQLTVQLQNNFQAISNSIGDIYSRLD
QITADAQVDRLITGRLAALNAFVAQSLTKYAEVQASRTLAKQKVNECVKSQSPRYGFCGDGEHIFSLTQAAPQGLMFLHTVLVPNGFINVTAVTGLCVDE
TATLRGF-VLFVQNGNYLVSPRKMFEPRRPEVADFVQVKTCTISYVNITNNQLPDIIPDYVDVNKTIDEILANL---
>tr|A0A0C5L1S5|A0A0C5L1S5_9ALPC Spike protein OS=Porcine epidemic diarrhea virus GN=S PE=4 SV=1
------------------------GNISIPTNFSMSIRTEYLQLYNTPVSVDCATYVCNGNSRCKQLLTQYTAACKTIESALQLSARLESVEVNSMLTIS
EEALQLATIFNGDGYNFTNVLGVSVYVQKRSFIEDLLFNKVVTNGLGTDEDYKRCSNGRSVADLVCAQYYSGVMVLPGVVDAEKLHMYSASLIGGMVLGG
FT----SAAALPFSYAVQARLNYLALQTDVLQRNQQLLAESFNSAIGNITSALNTVAHALTKVQEVVNSQGAALTQLTVQLQHNFQAISSSIDDIYSRLD
ILLADVQVDRLITGRLSALNAFVAQTLTKYTEVQASRKLAQQKVNECVKSQSQRYGFCGGGEHIFSLVQAAPQGLLFLHTVLVPGDFVDVIAIAGLCVND
EATLRGL-VLFTHETEYFVSSRRMFEPRKPTVSDFVQIESCVVTYVNLTRDQLPDVIPDYIDVNKTLDEILASL---
>tr|S5YNL4|S5YNL4_9ALPC Spike glycoprotein OS=Bat coronavirus CDPHE15/USA/2006 GN=S PE=4 SV=1
------------------------GVISIATNFTLSVVTEYIQLANTPISVDCAMYVCNGNPRCNMLLAQYSSACQTIENALQLSAKLESIEVTNMLTVS
EDNLQIANIFNGGGYNFTNLMGTTY--STKSVVEDILFDKVVTSGLGTDADYKACSNGLSIADLVCAQYYQGVMVLPGVVDAAKLHMYSASLMGGMALGG
VT----AAAALPFSYAVQARLNYVALQTDVLQRNQQILAESFNNAIGNITNALSTVAEALSKVQDVVNNQGMALNHLTLQLQNNFQAISSSIADIYRRLD
QLTADAQVDRLINGRLAALNAFVSQTLTKYSQVQASRSLAKQKINECVLSQSPRYGFCGDGRHVFTVTQAAPQGILFLHTVLRPTGSVNVTAAAGICVDG
AGALNGL-VLIYQDGTYLITPRVMFEPRQPQISDFVRIEGCDVEYFNVTGESLPDIFPDFIDVNKTLEDILSQL---
>tr|Q0Q4F4|Q0Q4F4_9ALPC Spike OS=Bat coronavirus A701/2005 GN=S PE=4 SV=1
------------------------GVISIPTNLTMQIRTEYIQLFSKPVSIDCAMYVCNGNERCNRLLGQYASACRTIESSLQLSARLESVEVNDMLTIS
EKALELGTIFGGGDYNFTNVLGTST--GQKSVIEDILFDKVVTNGLGTDEDYKKCTNGLSISDLVCAQYYNGIMVLPGVADAEKVHMYSASLMGGMALGG
IT----AAAALPFSYAVQARLNYVALQTDVLQRNQQLLAQSFNNAIGNITMALSTVAQALTKVQDVVNGQGLALSHLTNQLQNNFQAISSSISDIYARLD
QLTADAQVDRLITGRLSALNAFVSQTMTRYVEVQASRRLAQQKVNECVKSQSTRYGFCGDGEHIFSMVQGAPQGLMFLHTVLVPSGYVNVTAVSGLCVDD
TAVLRGL-VMFKQDNSYFLTPRKMFEPRAISVTDLVQVETCLVAYFNLSSDQLPDVVPDYIDVNKTLEDILASL---
>tr|F1DAY3|F1DAY3_9ALPC Spike protein OS=Chaerephon bat coronavirus/Kenya/KY41/2006 GN=S PE=4 SV=1
------------------------GLIAIPSNFTMAVVTEYLQLFNNPVSVDCAMYVCNGNERCNVLLTQYTSACQTIERALQSSARLEAAEVSEMITAS
PSALNVSTIFPSGGYNFTSVLSRSY--GGRSFIEDVLFEKVVTTGLGTDQDYKACSKGLSIADLACAQYYSGIMVLPGVVDSGKMAMYTASLLGGMVLGG
LT----SAAATPFSIAVQARLNYVALQTNVLQRNQQILAESFNYAMGNITEALSTVAQALSKVQDVVNTQSDALNHLTKQLQHNFQTISNSISDIYGRLN
QLEADAQVDRIIVGRIAALNAFVSQALTRYTEVQASRKLALQKVNECVKSQSKRFGFCGNGEHIFSVVQAAPQGLLFLHTVLKPDSFVQVHAVAGLCVEN
TAVLRGY-TLFVNGSQLFISPRKMFEPRKPQVADFVQVSSCELSYFNITMEQLPDLVPDFVDVNKTLEEIFGSL---
>tr|D9J204|D9J204_9ALPC Spike protein OS=Mink coronavirus strain WD1133 PE=4 SV=1
------------------------GNVTIPSNFTISVQMEYVQVSTELVSIDCARYVCNGNARCGKLLSQYVSACHTIEQALAMGSRLESMELESMISIS
ANALKLASVFNSSADGLKDILPRK-NGSSRSTIEDLLFNKVVTTGLGTDEDYKRCTKGSDIADLACAQYYNGIMVLPGVANDGKMSMYTASLSGGISLGA
LG----GAVAIPFSLAVQARLNYVALQTDVLQRNQEILAASFNQAIGNITIALSTVAQALTKVQDVVNSQGKALNHLTLQLQNNFQAISSSIQDIYYKLD
DINADAQVDRLITGRLAALNAFVTQTLTRQAEVRASRQLAKEKVNECVRSQSSRFGFCGNGTHLFSLTNAAPNGMVFFHTVLVPTAYETVTAWSGICASD
TGIVKSL-TLFRNHGKFYLTPRTMYQPRVATSADFVQIVDCDVLFVNATILELPSIVPDYIDINKTVQDLLDSY---
>sp|P07946|SPIKE_CVPPU Spike glycoprotein OS=Porcine transmissible gastroenteritis coronavirus (strain Purdue) GN=S PE=1 SV=2
------------------------GNVTIPTNFTISVQVEYIQVYTTPVSIDCSRYVCNGNPRCNKLLTQYVSACQTIEQALAMGARLENMEVDSMLFVS
ENALKLASVFNSSEEGLKYILPSHNSRKYRSAIEDLLFDKVVTSGLGTDEDYKRCTGGYDIADLVCAQYYNGIMVLPGVANADKMTMYTASLAGGITLGA
LG----GAVAIPFAVAVQARLNYVALQTDVLNKNQQILASAFNQAIGNITQSLATVAKALAKVQDVVNIQGQALSHLTVQLQNNFQAISSSISDIYNRLD
ELSADAQVDRLITGRLTALNAFVSQTLTRQAEVRASRQLAKDKVNECVRSQSQRFGFCGNGTHLFSLANAAPNGMIFFHTVLLPTAYETVTAWPGICASD
TGVVKQL-TLFRNLDKFYLTPRTMYQPRVATSSDFVQIEGCDVLFVNATVSDLPSIIPDYIDINQTVQDILENF---
>tr|D3XGI6|D3XGI6_9ALPC Spike glycoprotein OS=Ferret systemic coronavirus GN=S PE=4 SV=1
------------------------GNVTIPSNFTISVQVEYLQMSSEAVSIDCARYVCNGNPRCDRLLTQYVSACHTIEQALSTSMRLEALELESMISIS
DNALQLASVFNSSSDGLKDLLPRKNCGTCGSAIEELLFNKVVTTGLGTDEDYKRCTNGLDIADLVCAQYYNGIMVLPGVVNADKMAMYTASLAGGITLGV
LG----GLVSVPFATAVQARLNYVALQTDVLQQNQKILAASFNQAIGNITLAFSTVVQALTKVQNVVNSQGKALNYLTAQLQNNFQAISSSIEDIYHRLD
EVNADVQVDRLITGRLAALNAFVTQALTNRAQVRASRQLAKDKINECVRSQSSRFGFCGNGTHLFSLANAAPRGVMLFHTVLLPTSYKTVMAWSGVCATS
TGIVKSL-TLFKNHGRFYLTPRTMYEPRVATMSDFVQIESCTTTFVNATVSEIPSIIPDYIDINETLKDMLEQY---
>tr|A0A0K2SF41|A0A0K2SF41_9ALPC Spike protein OS=Ferret coronavirus GN=S PE=4 SV=1
------------------------GNITIPSNFTISVQVEYLQMSSELVSIDCARYVCNGNARCNKLLTQYMSACHTIEQALQTGVRLESLELESMISIS
DAALAIASVFNSSDDGLMNILPKKGCGSCRSTIEDLLFNKVVTSGLGTDEDYKRCTKGLDIADLVCAQYHNGIMVLPGVVNSDKMAMYTASLAGGITLGA
LG----GLVAVPFATAVQARLNYVALQTDVLQKNQKILAASFNQAIGNITQALSTVAQALTKVQDVVNSHGKALNQLTAQLQNNFQAVSSSIADIYYRLD
ELQADAQVDRLITGRLAALNAFVTQTLTRMTQVRASRQLAKEKINECVRSQSSRFGFCGNGTHLFSLANAAPSGIMLFHTVLVPTSYTSVTAWSGICFE-
NGIVKSL-TLFKNHGKFYLTPRTMYEPRFATSADFVRINSCATTFVNATAIELPNIIPDYIDVNKTIQDMLEQY---
>tr|C5IG86|C5IG86_9ALPC Spike glycoprotein OS=Feline coronavirus GN=S PE=4 SV=1
------------------------GNISIPKNFTVAVQAEYIQIQVKPVVVDCAKYVCNGNRHCLNLLTQYTSACQTIENALNLGARLESLMLNDMITVS
DRSLELATVFNTTVDGLRYLLPLRI--GKRSAVEDLLFNKVVTSGLGTDDDYKKCSSGTDVADLVCAQYYNGIMVLPGVVDHNKMAMYTASLIGGMALGS
IT----SAVAVPFAMQVQARLNYVALQTDVLQENQKILANAFNNAIGNITLAFNTMASALTKIQSVVNQQGEALSQLTSQLQKNFQAISSSIAEIYNRLE
KVEADAQVDRLITGRLAALNAYVSQTLTQYAEVKASRQLAMEKVNECVKSQSDRYGFCGNGTHLFSLVNSAPEGLLFFHTVLLPTEWEEVTAWSGICVNN
TAVLKEH-SIFSYNNTYMVTPRNMFKPRKPQMSDFVQITSCEVTFLNTTYTKFHEIVIDYIDINKTISDMLEQY---
>tr|A0A0P0KMM1|A0A0P0KMM1_CVH22 Spike glycoprotein OS=229E-related bat coronavirus PE=4 SV=1
------------------------ANLSIPTNWSSSVQVEYLQITNTPVLVDCTTYVCNGNHRCIELLKQYTSACTTIEQALQLSARLESAEVSSMLTYD
ANAFTLANVF--GEYNLSSVLPQLPTRAGRSFVEDLLFNKVVTSGLGTDADYKSCSKGLSIADLACAQYYNGIMVLPGVADAERMAMYTGSLIGGMALGG
IT----GAAAIPFSLAVQARLNYVALQTDVLQRNQQMLADSFNKAMANVVDAVHTVASALNKVQEVVNHQGRALNQLTLQLRQNFQAISSSIQSIYDRLD
DIQADQQVDRLINGRLAALNAFVAQTLTKYTEVRASRQLATQKVNECVKSQSSRYGFCGNGTHLFSIVNAAPEGMLFMHTVLVPTAHVSVEAYSGLCVDG
VGVLRNL-ALYKDGEDFRITSRVMFEPRIPTIADFARIADCNVTFVNATSETLPQIIPDYVDVNKTIEDLLERL---
>sp|Q6Q1S2|SPIKE_CVHNL Spike glycoprotein OS=Human coronavirus NL63 GN=S PE=1 SV=1
------------------------ANLSIPSNWTTSVQVEYLQITSTPIVVDCATYVCNGNPRCKNLLKQYTSACKTIEDALRLSAHLETNDVSSMLTFD
SNAFSLANVF--GDYNLSSVLPQRNIIAGRSALEDLLFSKVVTSGLGTDVDYKSCTKGLSIADLACAQYYNGIMVLPGVADAERMAMYTGSLIGGMVLGG
LT----SAAAIPFSLALQARLNYVALQTDVLQENQKILAASFNKAINNIVASIHTVTIALNKIQDVVNQQGSALNHLTSQLRHNFQAISNSIQAIYDRLD
SIQADQQVDRLITGRLAALNAFVSQVLNKYTEVRGSRRLAQQKINECVKSQSNRYGFCGNGTHIFSIVNSAPDGLLFLHTVLLPTDYKNVKAWSGICVDG
IGVLRNL-VLYSDNGVFRVTSRVMFQPRLPVLSDFVQIYNCNVTFVNISRVELHTVIPDYVDVNKTLQEFAQNL---
>tr|A0A0P0KBC5|A0A0P0KBC5_CVH22 Spike glycoprotein OS=229E-related bat coronavirus PE=4 SV=1
------------------------ANLSIPSNWTTSVQVEYLQITSTPIVVDCSTYVCNGNVRCVELLKQYTSACKTIEDALRISARLESADVSDMLTFD
KKAFTLANVF--GDYNLSSVIPSLPTVAGRSAIEDILFSKVVTSGLGTDADYKKCTKGLSIADLACAQYYNGIMVLPGVADAERMAMYTGSLIGGMALGG
LT----SAAAIPFSLALQARLNYVALQTDVLQENQKILAASFNKAMTNIVDAIQTVATALNKIQDVVNQQGNALNHLTSQLRQNFQAISSSIQAIYDRLD
TIQADQQVDRLITGRLAALNAFVAQTLTRYTEVRASRQLAQQKVNECVKSQSNRYGFCGNGTHIFSIVNAAPEGLVFLHTVLLPTQYKDVEAWSGLCVEE
VGVLRNL-ALYKEGGKFMITSRVMFEPRVPTMADFVQIEDCNVTFVNISRAELHSVVPEYVDVNKTLQDLLERL---
>tr|A4ULL1|A4ULL1_9ALPC Spike protein OS=Bat coronavirus Shandong/977/2006 GN=S PE=4 SV=1
------------------------GNVSIPSNFTVSVQVEYLQMYNKPVSVDCSTYVCNGNPRCLKLLTQYATACRTIEESLQLSARLESVEVANMISVS
EEAIQLANVF--DTYNISALLPRGQ--SRGSVIEDLLFNKVITSGLGTDEDYKACTGEGALADVFCAQYYNGIMVLPGVVDEAKMGLYTASLTGAMVMGG
IT----AAAAIPFSLAVQSRLNYVALQTDVLQENQKILASAFNSAMSNITYAINTVAQALGKIQNVVNDQGQALSQLTRQLASNFQAISSSIQDIYNRLN
GLEADAQVDRLITGRLAALNAFVTQTLTKYTEVRASRQLAQQKINECVKSQSSRYGFCGNGTHLFSISNAAPQGIIFFHTVLLPTEYETVEAWSGVCVNS
QGVLRHD-ALYKRNDSYYITSRDMYEPRVPQESDFVRITGCSVVYLNITHTQIGEIIPEYIDVNKTLEEFLSSY---
>tr|K4K211|K4K211_9ALPC Spike glycoprotein OS=Hipposideros bat coronavirus HKU10 GN=S PE=4 SV=1
------------------------ANITIPSNFSISVQAEYVQMFLTPVSVDCNMYVCNGNRHCLRLLGEYVTACKNIEAALQLSARLESIEVNNFITVS
ENAISLANIF--DSYNLSVLLPKQN--GK-SVIEDILFDKVVTNGLGTDQDYKECIKRSDVADVACAQYYNGIMVLPGVVDDVKMGLYTASLTGAMVMGG
LT----AAAAIPFSIAVQSRLNYVALQTDVLQKNQQILADSFNNAMSNITMAISTVAQALSKVQSVVNEQGEALSQLTKQLASNFQAISSSIEDIYNRLD
MLAADAQVDRLITGRIGALNAFVTQTLTKYTEVRASRQLALQKINECVKSQSSRFGFCGNGTHLFSIANAAPNGIMLFHTVLMPTEYVVVRAWAGLCIED
KAVLRKT-TLFKTGETYYITTRDMYQPRLPQVSDFVQIKDCQVDYLNLTSDEVNNVIPDYIDVNKTLEDFGQIL---
>tr|F1DAX6|F1DAX6_9ALPC Spike protein OS=Cardioderma bat coronavirus/Kenya/KY43/2006 GN=S PE=4 SV=1
------------------------ANITVPVNFTVSIQVEFVQMYNKPVSVDCAVYVCSGNPKCLRLLTQYASACRTIEDALQLSARLESVELLNLLTVS
DDAVRLANIF--DNYNVSALLPRAS--GRGSFIEDLLFDKVVTSGLGTDQDYKACAGDGHLADTFCAQYYNGIMVLPGVVDATKMGLYTTSLLGGMVLGG
LT----SAAAIPFSVAVQSRLNYVALQTDVLQRNQQQLATAFNNALGNITLAINTVAQAMGKIQTVVNEQGHALSQLTRQLASNFQAISSSIQDIYNRLE
GLEADAQVDRLITGRLAALNAFVTQTLTKYTEVRASRQLAQEKVNECVKSQSVRFGFCGNGTHLFSLANAAPQGIMFFHTVLVPTQYIDVQAWAGVCVDN
TGILRKT-TLFKRDDKYYVTTRDMYEPRVPVASDFVRIANCSVTYVNITQDTLGDIIPEYVDVNKTLDDLLNNL---
>tr|F1DB07|F1DB07_9ALPC Spike protein OS=Miniopterus bat coronavirus/Kenya/KY27/2006 GN=S PE=4 SV=1
------------------------GNITIPANFSFVVQPEYIQIMTKPVSVDCSVYVCNGNPRCLQLLTQYASVCRTVEEPLQLNARLEALELTSMIVVQ
ERTLNLGVSFN-HTFDLSAALPPRP--RSRSAIEDLLFDKVVTSGLGTDEDYKACAARMTIAEAGCVQYYNGIMVLPGVVDPSLLSQYTAALTGAMVLGG
VT----AGVAIPFSLAVQSRLNYLALQTDVLQRNQMILAQSFNAAMGNITIALTTIAQALNKVENVVNEQGTALSQLTKQLASNFQAISSSIEDLYNRLD
SLEADQQVDRLITGRLAALNAFVTQQLLRYSEVRSSRQLAQEKINECVKSQSSRYGFCGNGTHVFSVANAAPDGIMFLHANLVPTSFIEVSAFAGVCVDG
-AVLRDE-VLFLKPNNYLITPRLLFEPRVPVSADFVEVSSCNVTFVNLTVNELPELLPDYIDVNKTLKEFAATI---
>tr|F1DB14|F1DB14_9ALPC Spike protein OS=Miniopterus bat coronavirus/Kenya/KY33/2006 GN=S PE=4 SV=1
------------------------GYISVPTNFTFSVQAEYIQIMMKPVSVDCSVYVCNGNPRCLQLLTQYASACRTIEQALQLSARLESVEVNSMVAIS
EQALALGVIFN-NTFNMSAVVPPNV--GGRSAIEDLLFDKVVTSGLGTDTDYKECAAKMTIAEAGCVQYYNGIMVLPGVVDPSLLGQYTAALTGGMVLGG
IT----AGAAIPFSIAVQSRINYLALQTDVLQRNQQILAESFNAAMGNITTALSTVAQALNKVQSVVNEQGTALSQLTKQLASNFQAISSSIEDLYNRLG
AVEADQQVDRLITGRLAALNAFVAQQLTRYTEVKASRQLAQEKVNECVKSQSFRYGFCGNGTHVFSVANAAPEGIMFLHTVLQPTAFVNVSAFAGLCVDG
SAVLKGE-VLFKKPGQYLISPRRMFEPRVPQASDFVQIVNCSVSYVNISSQNLSEIIPDYIDVNKTLEDFLQQL---
>tr|V5TFD8|V5TFD8_9GAMC Spike glycoprotein OS=Bottlenose dolphin coronavirus HKU22 GN=S PE=4 SV=1
------------------------GEVVLPRTLMLHTTTEFIQTHSPKIVIDCNKYVCGSSERCRRILIKYGGFCESIIRLLNGVNMADDVSVTDFLDNF
NISISLQSLGSFDGYGFQKFLPKSDPRQSRSTIEDLLFDKVTTVGLGTDADYDKCTKGLSVADLVCAQYYNGIMVLPGVADAEKMAMYTGALVGGMALGG
IT----AAASIPFATQIQARVNYLALTQNAIQENQKIIVQQFNKAIDSMTSAFSAVSSAITEIQNTVNAQSQALTKLLGQLNYNFGATTSSIKELYERLA
QLEADIQVDRLINGRLTALSAFVAARQVEASRVASQRVLAAEKINECVKSTSNRYGFCGNGTHIISFPQNAPNGMLFVHFSLVPNETITVYGIIGLCLNS
IGIVPDRGIFIKCSGSFAITSREQYNPRQITTGDIQMLTSCNSSYTHIEWSQLPLVAPPYKDFDQEFEELYEK----
>tr|A8JP00|A8JP00_9ALPC Spike glycoprotein OS=Rhinolophus bat coronavirus HKU2 GN=S PE=4 SV=1
------------------------RFTELPLDHQLVLTEQFLQTTMPKFSISCETYICDVSKACKNLLFRYGGFCQKIEADIRGAGVLLDSDVSGLYSTI
AAK--TSSIPTTDRFNVSQFLPKVQSFESRSVIEDLLFSKIETTGPGFYGDYYNCKK-NAIQDLTCAQYHNGILVIPPVMDAETLGMYGGIAAASLTLGI
F--G-GQAGITTWSLAMAGRLNALGVVQNALVDDVNKLANGFNQLTASVSKLALTTSSALQAIQAVVNQNAAQVESLVSGITENFGAISTNFKVISQRLD
KLEADVQMDRLINGRMNVLQLFVTNYKLKIAELRNTHRYVQSLINECVYAQSLRNGFCGQGLHVLSLMQNAPSGIMFFHYSLIPNNTIIVKTTPGLCESD
KCIVAKDGVLVSANSYWQWSPRNLYKPENLTFANVIAVSR-GANYTTLNRTFDIPELNNTFPIEEEFREYFQNMSS-