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OPENSEQ.org

YBHN - Inner membrane protein YbhN
UniProt: P75770 Sequence
Download Alignment
We filter this alignment to remove sites that have > 75% gaps before running GREMLIN.
EcoGene: EG13670
Length: 318 (302)
Sequences: 445
Seq/Len: 1.47

YBHN
Paralog alert: 0.23 [within 20: 0.01] - ratio of genomes with paralogs
GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:
i j Scaled Score Prob
94_A 296_A 2.192 0.99
66_G 82_K 2.164 0.99
169_I 173_M 1.898 0.97
76_C 122_T 1.803 0.95
286_V 290_F 1.799 0.95
143_G 168_G 1.757 0.95
91_I 290_F 1.752 0.94
96_N 106_I 1.715 0.94
35_D 38_E 1.646 0.92
246_A 262_V 1.592 0.90
167_L 173_M 1.587 0.90
217_M 233_Y 1.585 0.90
180_W 210_L 1.578 0.89
65_Y 97_L 1.576 0.89
71_L 129_L 1.559 0.88
92_C 135_W 1.551 0.88
201_S 204_F 1.518 0.87
240_L 293_L 1.515 0.87
67_C 211_I 1.509 0.86
43_I 220_G 1.475 0.84
39_V 275_G 1.466 0.84
236_V 240_L 1.463 0.84
134_N 216_W 1.418 0.81
27_L 268_A 1.389 0.79
224_W 239_V 1.386 0.79
166_I 170_G 1.383 0.79
213_S 256_I 1.364 0.78
215_N 259_L 1.351 0.77
147_T 165_R 1.346 0.76
72_A 130_S 1.331 0.75
206_L 210_L 1.33 0.75
290_F 294_L 1.316 0.74
172_L 176_A 1.311 0.73
223_I 263_F 1.307 0.73
68_Y 93_Y 1.304 0.73
101_T 110_Y 1.298 0.72
65_Y 104_G 1.298 0.72
58_V 287_L 1.297 0.72
59_V 63_L 1.294 0.72
260_E 265_A 1.29 0.72
78_H 122_T 1.286 0.71
42_V 46_Y 1.286 0.71
19_F 51_L 1.282 0.71
99_L 104_G 1.28 0.71
98_T 133_T 1.271 0.70
82_K 114_S 1.261 0.69
263_F 277_I 1.261 0.69
68_Y 215_N 1.256 0.69
131_I 212_S 1.253 0.69
135_W 143_G 1.253 0.69
55_V 176_A 1.247 0.68
144_I 302_L 1.244 0.68
208_Q 304_E 1.239 0.67
243_S 291_I 1.237 0.67
85_V 118_L 1.232 0.67
133_T 136_L 1.23 0.66
77_G 90_F 1.224 0.66
143_G 178_Y 1.223 0.66
107_G 289_Y 1.212 0.65
20_F 247_G 1.209 0.65
92_C 96_N 1.195 0.63
106_I 215_N 1.195 0.63
119_P 122_T 1.189 0.63
78_H 118_L 1.189 0.63
38_E 153_L 1.188 0.63
57_L 241_L 1.183 0.62
97_L 284_Y 1.183 0.62
48_R 52_L 1.18 0.62
142_A 156_H 1.18 0.62
18_L 203_K 1.179 0.62
91_I 129_L 1.175 0.61
24_I 167_L 1.174 0.61
49_V 56_G 1.173 0.61
169_I 302_L 1.171 0.61
177_V 180_W 1.169 0.61
26_L 293_L 1.165 0.60
176_A 179_L 1.159 0.60
129_L 147_T 1.155 0.59
134_N 228_G 1.155 0.59
138_Y 216_W 1.154 0.59
96_N 107_G 1.15 0.59
62_Y 89_S 1.149 0.59
159_V 185_A 1.147 0.59
91_I 299_C 1.147 0.59
134_N 219_M 1.143 0.58
61_S 254_A 1.142 0.58
222_I 287_L 1.142 0.58
17_W 162_T 1.14 0.58
16_T 222_I 1.139 0.58
167_L 289_Y 1.136 0.57
223_I 287_L 1.131 0.57
14_I 18_L 1.129 0.57
73_R 134_N 1.128 0.57
118_L 122_T 1.128 0.57
62_Y 90_F 1.127 0.57
47_N 282_L 1.126 0.56
75_Y 284_Y 1.122 0.56
141_L 246_A 1.122 0.56
168_G 171_L 1.12 0.56
64_I 218_V 1.118 0.56
134_N 215_N 1.107 0.54
182_C 205_A 1.104 0.54
136_L 279_A 1.103 0.54
65_Y 216_W 1.102 0.54
237_L 241_L 1.101 0.54
56_G 302_L 1.1 0.54
43_I 89_S 1.098 0.54
98_T 101_T 1.097 0.53
178_Y 205_A 1.095 0.53
67_C 70_L 1.094 0.53
41_K 59_V 1.091 0.53
179_L 273_S 1.087 0.52
82_K 86_M 1.086 0.52
136_L 208_Q 1.081 0.52
97_L 216_W 1.08 0.52
263_F 280_A 1.077 0.51
209_M 241_L 1.074 0.51
182_C 190_M 1.072 0.51
163_T 266_L 1.068 0.50
37_E 44_R 1.067 0.50
60_V 281_L 1.067 0.50
61_S 215_N 1.066 0.50
231_V 282_L 1.064 0.50
95_F 99_L 1.053 0.49
132_T 197_L 1.051 0.49
66_G 92_C 1.048 0.48
142_A 293_L 1.048 0.48
27_L 261_A 1.047 0.48
168_G 178_Y 1.039 0.47
60_V 218_V 1.036 0.47
84_Q 237_L 1.036 0.47
96_N 132_T 1.036 0.47
215_N 244_S 1.036 0.47
102_W 240_L 1.034 0.47
286_V 291_I 1.034 0.47
168_G 245_I 1.033 0.47
284_Y 290_F 1.032 0.47
282_L 290_F 1.03 0.47
94_A 227_L 1.03 0.47
208_Q 251_H 1.029 0.46
75_Y 129_L 1.029 0.46
32_K 179_L 1.028 0.46
163_T 166_I 1.025 0.46
74_F 153_L 1.024 0.46
28_V 167_L 1.024 0.46
183_A 202_W 1.022 0.46
233_Y 238_G 1.022 0.46
56_G 295_L 1.021 0.46
56_G 210_L 1.021 0.46
19_F 263_F 1.018 0.45
94_A 300_Y 1.017 0.45
95_F 106_I 1.016 0.45
48_R 79_K 1.015 0.45
214_V 256_I 1.015 0.45
36_W 284_Y 1.015 0.45
95_F 245_I 1.012 0.45
166_I 196_K 1.01 0.45
176_A 206_L 1.009 0.44
53_S 56_G 1.006 0.44
156_H 198_V 1.006 0.44
71_L 178_Y 1.006 0.44
98_T 208_Q 1.004 0.44
154_P 246_A 1.004 0.44
58_V 226_L 1.002 0.44
212_S 272_T 1.002 0.44
238_G 284_Y 1 0.44
46_Y 222_I 1 0.44
65_Y 212_S 1 0.44
Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Scaled Score = (raw_score/average(raw_scores)) > 1 are listed. For all 3L/2 predictions, click on one of the links below.
HHsearch Results:
PDB Chains Cov P(%) HHΔ   Acc
2mc7A10.09128.70.971Contact Map0
1jb0K10.22963.80.976Contact Map0
2wdqD30.33331.90.979Contact Map0.354
1zoyC10.33021.90.979Contact Map0.25
2h88C20.33021.70.98Contact Map0.167
2wdqC30.33331.60.98Contact Map0.335
2m20A20.17921.50.98Contact Map0.198
2l2tA20.13521.50.98Contact Map0.265
2k1aA10.11951.30.981Contact Map0.6
1iijA10.11011.30.981Contact Map0.41

Sequence Conservation (Image Generated using WebLogo v3)
Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

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