| UniProt: | P68919 | Sequence |
Download Alignment We filter this alignment to remove sites that have > 75% gaps before running GREMLIN. |
| EcoGene: | EG10885 | ||
| Length: | 94 (93) | ||
| Sequences: | 1317 | ||
| Seq/Len: | 14.16 |
| RL25
Paralog alert: 0.01 [within 20: 0.00] - ratio of genomes with paralogs |
Legend: The darker and larger the blue dots, the higher coevolution strength.
Residue pairs sorted by coevolution strength:
| i | j | Scaled Score | Prob | |
| 5_N | 64_V | 3.313 | 1.00 | |
| 43_D | 46_K | 2.897 | 1.00 | |
| 25_K | 41_E | 2.838 | 1.00 | |
| 20_L | 41_E | 2.702 | 1.00 | |
| 30_I | 40_I | 2.271 | 1.00 | |
| 62_T | 69_E | 2.094 | 1.00 | |
| 47_V | 89_I | 2.058 | 1.00 | |
| 7_E | 25_K | 2.018 | 1.00 | |
| 30_I | 63_I | 1.886 | 1.00 | |
| 30_I | 72_V | 1.81 | 1.00 | |
| 4_I | 9_R | 1.761 | 1.00 | |
| 25_K | 43_D | 1.657 | 1.00 | |
| 29_I | 39_A | 1.639 | 1.00 | |
| 64_V | 69_E | 1.61 | 1.00 | |
| 60_V | 94_A | 1.6 | 1.00 | |
| 15_G | 18_R | 1.552 | 1.00 | |
| 13_G | 17_S | 1.505 | 1.00 | |
| 62_T | 71_K | 1.484 | 1.00 | |
| 70_I | 93_R | 1.432 | 1.00 | |
| 7_E | 66_D | 1.401 | 0.99 | |
| 28_A | 40_I | 1.399 | 0.99 | |
| 11_E | 19_R | 1.369 | 0.99 | |
| 8_V | 66_D | 1.366 | 0.99 | |
| 28_A | 89_I | 1.358 | 0.99 | |
| 49_N | 52_A | 1.328 | 0.99 | |
| 6_A | 9_R | 1.326 | 0.99 | |
| 33_G | 93_R | 1.3 | 0.99 | |
| 3_T | 62_T | 1.275 | 0.99 | |
| 44_H | 48_M | 1.27 | 0.99 | |
| 75_Q | 92_V | 1.253 | 0.99 | |
| 19_R | 23_A | 1.243 | 0.98 | |
| 17_S | 20_L | 1.209 | 0.98 | |
| 3_T | 64_V | 1.178 | 0.98 | |
| 26_F | 47_V | 1.177 | 0.98 | |
| 77_V | 89_I | 1.16 | 0.97 | |
| 51_Q | 86_L | 1.148 | 0.97 | |
| 28_A | 47_V | 1.105 | 0.96 | |
| 6_A | 65_V | 1.103 | 0.96 | |
| 30_I | 70_I | 1.098 | 0.96 | |
| 7_E | 41_E | 1.089 | 0.96 | |
| 9_R | 21_R | 1.087 | 0.96 | |
| 44_H | 85_K | 1.03 | 0.94 | |
| 48_M | 52_A | 1.017 | 0.93 | |
| 8_V | 68_K | 1.003 | 0.93 |
- Text file of predictions (all 3L/2 predictions)
- Generate restraints for ROSETTA Structure Modeling
Legend: Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on 10 HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.
| PDB | Chains | Cov | P(%) | HHΔ | Acc | |
| 1b75A | 1 | 1 | 100 | 0.03 | Contact Map | 0.706 |
| 1feuA | 2 | 0.9468 | 99.9 | 0.122 | Contact Map | 0.77 |
| 2zjrS | 1 | 0.9043 | 99.9 | 0.146 | Contact Map | 0.448 |
| 3s51A | 4 | 0.8617 | 6.7 | 0.916 | Contact Map | 0.133 |
| 2z7bA | 1 | 0.8511 | 4.7 | 0.921 | Contact Map | 0.21 |
| 1htwA | 3 | 0.8085 | 4.3 | 0.923 | Contact Map | 0.039 |
| 4j2nA | 5 | 0.5532 | 3.8 | 0.925 | Contact Map | 0.382 |
| 2r01A | 1 | 0.6489 | 3.8 | 0.925 | Contact Map | 0.196 |
| 2vvfA | 6 | 0.7979 | 3.7 | 0.926 | Contact Map | 0.16 |
| 1z4hA | 1 | 0.5745 | 3.5 | 0.926 | Contact Map | 0.248 |
Sequence Conservation (Image Generated using WebLogo v3)