| UniProt: | P45472 | Sequence |
Download Alignment We filter this alignment to remove sites that have > 75% gaps before running GREMLIN. |
| EcoGene: | EG12786 | ||
| Length: | 100 (87) | ||
| Sequences: | 1338 | ||
| Seq/Len: | 15.38 |
| YHBQ
Paralog alert: 0.07 [within 20: 0.01] - ratio of genomes with paralogs |
Legend: The darker and larger the blue dots, the higher coevolution strength.
Residue pairs sorted by coevolution strength:
| i | j | Scaled Score | Prob | |
| 52_A | 63_A | 3.023 | 1.00 | |
| 26_R | 30_Q | 2.997 | 1.00 | |
| 18_T | 67_V | 2.554 | 1.00 | |
| 65_Y | 69_Q | 2.259 | 1.00 | |
| 8_L | 18_T | 2.159 | 1.00 | |
| 4_W | 20_I | 2.113 | 1.00 | |
| 56_D | 59_L | 2.102 | 1.00 | |
| 20_I | 61_L | 2.064 | 1.00 | |
| 24_V | 51_S | 1.953 | 1.00 | |
| 63_A | 66_R | 1.927 | 1.00 | |
| 15_K | 39_A | 1.892 | 1.00 | |
| 6_L | 67_V | 1.846 | 1.00 | |
| 29_Q | 33_S | 1.797 | 1.00 | |
| 9_I | 28_Y | 1.783 | 1.00 | |
| 57_R | 61_L | 1.728 | 1.00 | |
| 72_K | 76_E | 1.724 | 1.00 | |
| 58_S | 62_R | 1.667 | 1.00 | |
| 70_L | 74_Q | 1.653 | 1.00 | |
| 28_Y | 32_Q | 1.635 | 1.00 | |
| 10_R | 47_T | 1.617 | 1.00 | |
| 13_D | 43_K | 1.577 | 1.00 | |
| 37_A | 41_R | 1.562 | 1.00 | |
| 71_T | 74_Q | 1.49 | 1.00 | |
| 10_R | 14_N | 1.484 | 1.00 | |
| 54_V | 63_A | 1.472 | 1.00 | |
| 4_W | 57_R | 1.434 | 1.00 | |
| 10_R | 49_V | 1.313 | 0.99 | |
| 16_L | 76_E | 1.269 | 0.99 | |
| 63_A | 78_L | 1.26 | 0.99 | |
| 50_F | 63_A | 1.243 | 0.98 | |
| 10_R | 76_E | 1.231 | 0.98 | |
| 11_T | 39_A | 1.226 | 0.98 | |
| 32_Q | 44_G | 1.208 | 0.98 | |
| 22_T | 26_R | 1.196 | 0.98 | |
| 24_V | 48_L | 1.154 | 0.97 | |
| 73_R | 77_R | 1.149 | 0.97 | |
| 21_T | 24_V | 1.129 | 0.97 | |
| 77_R | 81_E | 1.121 | 0.97 | |
| 40_L | 45_E | 1.113 | 0.96 | |
| 32_Q | 46_L | 1.109 | 0.96 | |
| 20_I | 57_R | 1.095 | 0.96 | |
| 8_L | 67_V | 1.085 | 0.96 | |
| 30_Q | 35_K | 1.066 | 0.95 | |
| 58_S | 61_L | 1.042 | 0.94 | |
| 6_L | 18_T | 1.033 | 0.94 | |
| 9_I | 45_E | 1.018 | 0.93 | |
| 74_Q | 77_R | 1.01 | 0.93 |
- Text file of predictions (all 3L/2 predictions)
- Generate restraints for ROSETTA Structure Modeling
Legend: Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on 10 HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.
| PDB | Chains | Cov | P(%) | HHΔ | Acc | |
| 1zg2A | 1 | 0.96 | 100 | 0.091 | Contact Map | 0.527 |
| 1ywlA | 1 | 0.91 | 100 | 0.155 | Contact Map | 0.43 |
| 1mk0A | 1 | 0.84 | 97.9 | 0.735 | Contact Map | 0.468 |
| 1yd0A | 1 | 0.84 | 97.2 | 0.769 | Contact Map | 0.517 |
| 1yd6A | 4 | 0.84 | 96.9 | 0.776 | Contact Map | 0.758 |
| 2wshA | 4 | 0.81 | 61 | 0.879 | Contact Map | 0.383 |
| 3o6qA | 2 | 0.93 | 4.1 | 0.933 | Contact Map | 0.263 |
| 2ra8A | 1 | 0.87 | 3.9 | 0.933 | Contact Map | 0.164 |
| 3h4zA | 3 | 0.37 | 3.2 | 0.936 | Contact Map | 0.269 |
| 4gbsA | 2 | 0.4 | 2.3 | 0.941 | Contact Map | 0.324 |
Sequence Conservation (Image Generated using WebLogo v3)