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OPENSEQ.org
HOKC - Protein HokC
UniProt: P0ACG4 Sequence
 Download Alignment
We filter this alignment to remove sites that have > 75% gaps before running GREMLIN.
EcoGene: EG10373
Length: 50 (50)
Sequences: 91
Seq/Len: 1.82
HOKC
Paralog alert: 0.60 [within 20: 0.03] - ratio of genomes with paralogs
Cluster includes: HOKA HOKB HOKC HOKD HOKE MOKC
GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:
i j Scaled Score Prob
32_V 45_T 2.393 1.00
25_T 41_V 2.108 0.99
28_D 32_V 1.566 0.92
31_E 40_E 1.531 0.91
7_M 41_V 1.519 0.90
7_M 34_I 1.432 0.87
4_H 47_Y 1.312 0.79
11_L 23_L 1.305 0.79
33_H 43_V 1.296 0.78
31_E 46_A 1.273 0.76
13_V 24_V 1.243 0.74
8_I 37_G 1.221 0.72
18_A 30_C 1.165 0.67
21_A 29_L 1.157 0.66
4_H 9_V 1.155 0.66
3_Q 7_M 1.136 0.64
20_V 50_E 1.131 0.63
9_V 16_I 1.129 0.63
28_D 48_E 1.112 0.62
35_R 40_E 1.056 0.56
41_V 49_S 1.043 0.54
21_A 35_R 1.039 0.54
4_H 42_A 1.036 0.53
21_A 43_V 1.03 0.53
31_E 42_A 1.004 0.50
Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Scaled Score = (raw_score/average(raw_scores)) > 1 are listed. For all 3L/2 predictions, click on one of the links below.
HHsearch Results:
PDB Chains Cov P(%) HHΔ   Acc
3dxiA20.522.70.905Contact Map0
4hq1A10.762.70.905Contact Map0
3b55A10.82.70.905Contact Map
2ztjA10.542.50.906Contact Map0
4jn6A20.62.40.907Contact Map0.067
1z1nX10.92.20.91Contact Map0
1ydnA40.561.90.912Contact Map0
3w5aC10.61.80.913Contact Map0
1sigA10.561.80.914Contact Map0
4kytB20.521.70.915Contact Map0
Sequence Conservation (Image Generated using WebLogo v3)
Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.
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