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OPENSEQ.org

FLIQ - Flagellar biosynthetic protein FliQ
UniProt: P0AC07 Sequence
Download Alignment
We filter this alignment to remove sites that have > 75% gaps before running GREMLIN.
EcoGene: EG11976
Length: 89 (89)
Sequences: 880
Seq/Len: 9.89

FLIQ
Paralog alert: 0.34 [within 20: 0.00] - ratio of genomes with paralogs
GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:
i j Scaled Score Prob
31_T 57_A 3.7 1.00
27_V 57_A 2.455 1.00
27_V 61_A 2.205 1.00
17_A 59_F 1.89 1.00
37_I 41_A 1.848 1.00
61_A 65_A 1.828 1.00
26_L 30_V 1.813 1.00
45_N 75_D 1.763 1.00
12_E 79_T 1.721 1.00
19_A 72_L 1.682 1.00
41_A 45_N 1.598 1.00
79_T 83_N 1.532 1.00
16_V 20_L 1.512 1.00
33_L 38_L 1.494 1.00
33_L 37_I 1.436 1.00
83_N 87_I 1.355 0.99
20_L 69_M 1.332 0.99
56_I 60_I 1.301 0.99
14_M 59_F 1.298 0.99
18_L 56_I 1.279 0.99
47_M 50_S 1.278 0.99
21_A 52_I 1.27 0.99
79_T 82_T 1.204 0.98
25_L 52_I 1.197 0.98
38_L 44_I 1.193 0.98
28_A 58_V 1.181 0.98
50_S 53_P 1.171 0.97
78_R 82_T 1.168 0.97
17_A 21_A 1.154 0.97
16_V 76_Y 1.149 0.97
18_L 67_P 1.148 0.97
16_V 72_L 1.121 0.96
47_M 52_I 1.086 0.96
55_I 84_L 1.084 0.95
81_F 84_L 1.073 0.95
24_L 69_M 1.065 0.95
8_M 11_T 1.063 0.95
27_V 65_A 1.063 0.95
70_L 74_L 1.044 0.94
34_I 38_L 1.043 0.94
62_I 87_I 1.04 0.94
25_L 36_S 1.019 0.93
16_V 78_R 1.016 0.93
55_I 67_P 1.014 0.93
29_L 53_P 1.012 0.93
15_K 45_N 1.009 0.93
Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Scaled Score = (raw_score/average(raw_scores)) > 1 are listed. For all 3L/2 predictions, click on one of the links below.
HHsearch Results:
PDB Chains Cov P(%) HHΔ   Acc
3tijA10.415712.70.908Contact Map0.77
3tuiA40.97754.80.924Contact Map0.349
3rlfF112.10.937Contact Map0.267
4eneA20.96631.40.942Contact Map0.15
2zjsE10.2361.40.943Contact Map0
3mktA20.98881.10.946Contact Map0.241
2d4uA20.359610.948Contact Map0.778
3zilB10.134810.948Contact Map0.028
2vv5A70.719110.948Contact Map0.492
3d31C2110.949Contact Map0.096

Sequence Conservation (Image Generated using WebLogo v3)
Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

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