| UniProt: | P0A9I8 | Sequence |
Download Alignment We filter this alignment to remove sites that have > 75% gaps before running GREMLIN. |
| EcoGene: | EG10655 | ||
| Length: | 108 (103) | ||
| Sequences: | 3494 | ||
| Seq/Len: | 33.92 |
| NIRD
Paralog alert: 0.52 [within 20: 0.07] - ratio of genomes with paralogs Cluster includes: HCAC NIRD |
Legend: The darker and larger the blue dots, the higher coevolution strength.
Residue pairs sorted by coevolution strength:
| i | j | Scaled Score | Prob | |
| 6_D | 103_V | 3.518 | 1.00 | |
| 78_R | 81_D | 3.51 | 1.00 | |
| 44_N | 55_S | 2.43 | 1.00 | |
| 10_I | 99_V | 2.288 | 1.00 | |
| 43_S | 93_K | 2.185 | 1.00 | |
| 42_I | 92_V | 2.145 | 1.00 | |
| 98_R | 105_Q | 2.039 | 1.00 | |
| 63_Q | 76_R | 2.037 | 1.00 | |
| 10_I | 39_V | 1.978 | 1.00 | |
| 30_I | 41_A | 1.942 | 1.00 | |
| 47_P | 77_F | 1.934 | 1.00 | |
| 22_L | 27_Q | 1.827 | 1.00 | |
| 41_A | 106_L | 1.8 | 1.00 | |
| 26_E | 43_S | 1.777 | 1.00 | |
| 6_D | 105_Q | 1.624 | 1.00 | |
| 96_E | 107_R | 1.618 | 1.00 | |
| 8_C | 13_I | 1.56 | 1.00 | |
| 52_S | 71_P | 1.554 | 1.00 | |
| 43_S | 95_Y | 1.531 | 1.00 | |
| 4_W | 98_R | 1.529 | 1.00 | |
| 18_G | 29_A | 1.527 | 1.00 | |
| 44_N | 53_V | 1.49 | 1.00 | |
| 33_P | 36_S | 1.482 | 1.00 | |
| 39_V | 97_A | 1.468 | 1.00 | |
| 9_K | 12_D | 1.449 | 1.00 | |
| 28_V | 41_A | 1.418 | 1.00 | |
| 100_K | 105_Q | 1.405 | 0.99 | |
| 76_R | 86_E | 1.39 | 0.99 | |
| 69_A | 76_R | 1.387 | 0.99 | |
| 38_Q | 80_S | 1.366 | 0.99 | |
| 60_A | 69_A | 1.357 | 0.99 | |
| 9_K | 103_V | 1.329 | 0.99 | |
| 27_Q | 44_N | 1.295 | 0.99 | |
| 14_L | 17_T | 1.239 | 0.98 | |
| 31_F | 42_I | 1.234 | 0.98 | |
| 18_G | 68_V | 1.23 | 0.98 | |
| 78_R | 85_M | 1.227 | 0.98 | |
| 15_P | 32_R | 1.214 | 0.98 | |
| 39_V | 104_V | 1.21 | 0.98 | |
| 41_A | 97_A | 1.2 | 0.98 | |
| 54_L | 92_V | 1.195 | 0.98 | |
| 8_C | 12_D | 1.175 | 0.98 | |
| 63_Q | 85_M | 1.154 | 0.97 | |
| 99_V | 104_V | 1.134 | 0.97 | |
| 46_D | 73_K | 1.092 | 0.96 | |
| 52_S | 72_L | 1.07 | 0.95 | |
| 40_F | 80_S | 1.068 | 0.95 | |
| 42_I | 94_H | 1.067 | 0.95 | |
| 60_A | 76_R | 1.063 | 0.95 | |
| 46_D | 70_S | 1.058 | 0.95 | |
| 39_V | 99_V | 1.057 | 0.95 | |
| 33_P | 40_F | 1.055 | 0.95 | |
| 18_G | 59_I | 1.055 | 0.95 | |
| 18_G | 31_F | 1.034 | 0.94 | |
| 32_R | 39_V | 1.022 | 0.93 | |
| 10_I | 102_G | 1.004 | 0.93 | |
| 8_C | 104_V | 1.001 | 0.92 |
- Text file of predictions (all 3L/2 predictions)
- Generate restraints for ROSETTA Structure Modeling
Legend: Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on 10 HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.
| PDB | Chains | Cov | P(%) | HHΔ | Acc | |
| 2jzaA | 1 | 0.9815 | 99.9 | 0.118 | Contact Map | 0.634 |
| 2jo6A | 1 | 0.9815 | 99.9 | 0.12 | Contact Map | 0.709 |
| 2i7fA | 2 | 0.9352 | 99.9 | 0.13 | Contact Map | 0.927 |
| 3gceA | 1 | 0.9352 | 99.9 | 0.13 | Contact Map | 0.856 |
| 3c0dA | 8 | 0.9815 | 99.9 | 0.137 | Contact Map | 0.833 |
| 2de6D | 3 | 0.9352 | 99.9 | 0.139 | Contact Map | 0.886 |
| 4aivA | 1 | 0.9815 | 99.9 | 0.146 | Contact Map | 0.809 |
| 1vm9A | 1 | 0.9259 | 99.9 | 0.157 | Contact Map | 0.888 |
| 1fqtA | 2 | 0.9259 | 99.9 | 0.159 | Contact Map | 0.885 |
| 3dqyA | 1 | 0.9167 | 99.9 | 0.162 | Contact Map | 0.946 |
Sequence Conservation (Image Generated using WebLogo v3)