| UniProt: | P0A9E9 | Sequence |
Download Alignment We filter this alignment to remove sites that have > 75% gaps before running GREMLIN. |
| EcoGene: | EG12031 | ||
| Length: | 219 (202) | ||
| Sequences: | 6046 | ||
| Seq/Len: | 29.93 |
| YEIL
Paralog alert: 0.78 [within 20: 0.09] - ratio of genomes with paralogs Cluster includes: CRP FNR YEIL |
Legend: The darker and larger the blue dots, the higher coevolution strength.
Residue pairs sorted by coevolution strength:
| i | j | Scaled Score | Prob | |
| 38_W | 95_A | 3.279 | 1.00 | |
| 24_L | 27_D | 2.797 | 1.00 | |
| 22_H | 92_W | 2.757 | 1.00 | |
| 44_R | 92_W | 2.669 | 1.00 | |
| 50_Y | 86_Q | 2.592 | 1.00 | |
| 185_L | 200_Q | 2.55 | 1.00 | |
| 143_A | 180_F | 2.433 | 1.00 | |
| 103_P | 107_N | 2.377 | 1.00 | |
| 43_T | 94_L | 2.368 | 1.00 | |
| 187_I | 194_L | 2.277 | 1.00 | |
| 138_L | 168_V | 2.249 | 1.00 | |
| 187_I | 196_K | 2.224 | 1.00 | |
| 139_V | 179_Q | 2.198 | 1.00 | |
| 32_E | 84_A | 2.188 | 1.00 | |
| 49_L | 85_V | 2.158 | 1.00 | |
| 159_H | 174_L | 2.121 | 1.00 | |
| 137_P | 140_N | 2.075 | 1.00 | |
| 97_P | 100_H | 2.018 | 1.00 | |
| 47_A | 85_V | 2.018 | 1.00 | |
| 142_L | 176_V | 2.002 | 1.00 | |
| 24_L | 90_E | 1.966 | 1.00 | |
| 20_L | 92_W | 1.96 | 1.00 | |
| 30_V | 85_V | 1.958 | 1.00 | |
| 50_Y | 84_A | 1.952 | 1.00 | |
| 197_N | 200_Q | 1.93 | 1.00 | |
| 87_A | 91_C | 1.914 | 1.00 | |
| 21_F | 95_A | 1.889 | 1.00 | |
| 31_Q | 34_Q | 1.874 | 1.00 | |
| 23_F | 29_I | 1.869 | 1.00 | |
| 32_E | 51_A | 1.862 | 1.00 | |
| 47_A | 91_C | 1.858 | 1.00 | |
| 23_F | 93_C | 1.771 | 1.00 | |
| 48_R | 60_L | 1.758 | 1.00 | |
| 198_R | 202_S | 1.752 | 1.00 | |
| 123_N | 126_N | 1.728 | 1.00 | |
| 22_H | 90_E | 1.717 | 1.00 | |
| 27_D | 87_A | 1.702 | 1.00 | |
| 138_L | 172_H | 1.702 | 1.00 | |
| 98_M | 102_R | 1.698 | 1.00 | |
| 28_Y | 86_Q | 1.613 | 1.00 | |
| 28_Y | 31_Q | 1.612 | 1.00 | |
| 58_V | 164_E | 1.612 | 1.00 | |
| 46_R | 89_E | 1.601 | 1.00 | |
| 48_R | 86_Q | 1.554 | 1.00 | |
| 178_A | 182_H | 1.542 | 1.00 | |
| 126_N | 130_L | 1.516 | 1.00 | |
| 25_A | 90_E | 1.508 | 1.00 | |
| 48_R | 58_V | 1.507 | 1.00 | |
| 179_Q | 183_D | 1.483 | 1.00 | |
| 106_L | 113_R | 1.477 | 1.00 | |
| 168_V | 173_L | 1.476 | 1.00 | |
| 25_A | 89_E | 1.466 | 1.00 | |
| 160_T | 170_Y | 1.445 | 1.00 | |
| 100_H | 103_P | 1.442 | 1.00 | |
| 139_V | 183_D | 1.442 | 1.00 | |
| 145_F | 166_L | 1.431 | 1.00 | |
| 64_F | 68_C | 1.397 | 0.99 | |
| 132_Q | 144_A | 1.387 | 0.99 | |
| 42_L | 47_A | 1.373 | 0.99 | |
| 42_L | 64_F | 1.37 | 0.99 | |
| 63_F | 165_Y | 1.37 | 0.99 | |
| 160_T | 164_E | 1.362 | 0.99 | |
| 180_F | 185_L | 1.352 | 0.99 | |
| 181_I | 188_K | 1.337 | 0.99 | |
| 159_H | 170_Y | 1.329 | 0.99 | |
| 116_C | 119_L | 1.327 | 0.99 | |
| 28_Y | 84_A | 1.32 | 0.99 | |
| 136_F | 144_A | 1.308 | 0.99 | |
| 72_E | 122_K | 1.302 | 0.99 | |
| 112_L | 116_C | 1.292 | 0.99 | |
| 181_I | 187_I | 1.287 | 0.99 | |
| 77_D | 124_Y | 1.267 | 0.99 | |
| 43_T | 92_W | 1.262 | 0.99 | |
| 132_Q | 136_F | 1.26 | 0.99 | |
| 40_F | 95_A | 1.253 | 0.99 | |
| 199_K | 202_S | 1.252 | 0.99 | |
| 36_P | 81_E | 1.25 | 0.99 | |
| 53_L | 57_R | 1.241 | 0.98 | |
| 29_I | 47_A | 1.23 | 0.98 | |
| 17_D | 100_H | 1.228 | 0.98 | |
| 42_L | 91_C | 1.225 | 0.98 | |
| 20_L | 43_T | 1.203 | 0.98 | |
| 200_Q | 203_G | 1.197 | 0.98 | |
| 154_L | 192_G | 1.185 | 0.98 | |
| 101_Y | 105_L | 1.153 | 0.97 | |
| 48_R | 161_Q | 1.138 | 0.97 | |
| 145_F | 162_A | 1.13 | 0.97 | |
| 18_T | 96_L | 1.124 | 0.97 | |
| 29_I | 40_F | 1.118 | 0.96 | |
| 143_A | 201_L | 1.117 | 0.96 | |
| 131_T | 135_S | 1.108 | 0.96 | |
| 103_P | 106_L | 1.103 | 0.96 | |
| 20_L | 94_L | 1.098 | 0.96 | |
| 142_L | 166_L | 1.09 | 0.96 | |
| 166_L | 173_L | 1.084 | 0.96 | |
| 26_R | 86_Q | 1.082 | 0.96 | |
| 169_S | 172_H | 1.07 | 0.95 | |
| 46_R | 65_A | 1.059 | 0.95 | |
| 102_R | 106_L | 1.051 | 0.94 | |
| 49_L | 64_F | 1.044 | 0.94 | |
| 13_D | 107_N | 1.037 | 0.94 | |
| 19_R | 95_A | 1.035 | 0.94 | |
| 18_T | 94_L | 1.033 | 0.94 | |
| 170_Y | 174_L | 1.032 | 0.94 | |
| 48_R | 88_I | 1.021 | 0.93 | |
| 21_F | 93_C | 1.012 | 0.93 | |
| 39_L | 101_Y | 1.011 | 0.93 | |
| 13_D | 108_D | 1.004 | 0.93 | |
| 143_A | 147_L | 1 | 0.92 |
- Text file of predictions (all 3L/2 predictions)
- Generate restraints for ROSETTA Structure Modeling
Legend: Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on 10 HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.
| PDB | Chains | Cov | P(%) | HHΔ | Acc | |
| 4ev0A | 2 | 0.9543 | 100 | 0.255 | Contact Map | 0.819 |
| 3dv8A | 1 | 0.9452 | 100 | 0.264 | Contact Map | 0.786 |
| 3dkwA | 10 | 0.9361 | 100 | 0.266 | Contact Map | 0.857 |
| 3d0sA | 2 | 0.9406 | 100 | 0.267 | Contact Map | 0.813 |
| 2gauA | 1 | 0.9498 | 100 | 0.269 | Contact Map | 0.818 |
| 3e97A | 1 | 0.9589 | 100 | 0.269 | Contact Map | 0.698 |
| 3e6cC | 1 | 0.9863 | 100 | 0.274 | Contact Map | 0.751 |
| 2oz6A | 1 | 0.8858 | 100 | 0.28 | Contact Map | 0.834 |
| 3fx3A | 2 | 0.9772 | 100 | 0.281 | Contact Map | 0.781 |
| 3kccA | 2 | 0.9087 | 100 | 0.281 | Contact Map | 0.88 |
Sequence Conservation (Image Generated using WebLogo v3)