| UniProt: | P0A9E5 | Sequence |
Download Alignment We filter this alignment to remove sites that have > 75% gaps before running GREMLIN. |
| EcoGene: | EG10325 | ||
| Length: | 250 (223) | ||
| Sequences: | 4628 | ||
| Seq/Len: | 20.75 |
| FNR
Paralog alert: 0.76 [within 20: 0.07] - ratio of genomes with paralogs Cluster includes: CRP FNR YEIL |
Legend: The darker and larger the blue dots, the higher coevolution strength.
Residue pairs sorted by coevolution strength:
| i | j | Scaled Score | Prob | |
| 67_S | 123_E | 2.978 | 1.00 | |
| 223_M | 238_A | 2.971 | 1.00 | |
| 53_Q | 56_Q | 2.948 | 1.00 | |
| 51_P | 120_M | 2.795 | 1.00 | |
| 73_S | 120_M | 2.761 | 1.00 | |
| 79_Y | 114_Q | 2.747 | 1.00 | |
| 78_S | 113_A | 2.698 | 1.00 | |
| 197_R | 212_S | 2.646 | 1.00 | |
| 171_A | 218_F | 2.631 | 1.00 | |
| 225_A | 232_T | 2.574 | 1.00 | |
| 166_A | 206_L | 2.425 | 1.00 | |
| 61_A | 112_F | 2.416 | 1.00 | |
| 225_A | 234_E | 2.389 | 1.00 | |
| 76_I | 113_A | 2.317 | 1.00 | |
| 170_L | 214_L | 2.294 | 1.00 | |
| 131_D | 135_K | 2.279 | 1.00 | |
| 59_F | 113_A | 2.274 | 1.00 | |
| 61_A | 80_T | 2.227 | 1.00 | |
| 35_N | 38_E | 2.221 | 1.00 | |
| 235_N | 238_A | 2.147 | 1.00 | |
| 151_I | 154_D | 2.084 | 1.00 | |
| 72_R | 122_C | 2.041 | 1.00 | |
| 167_E | 217_R | 1.951 | 1.00 | |
| 166_A | 210_T | 1.944 | 1.00 | |
| 53_Q | 118_T | 1.944 | 1.00 | |
| 79_Y | 112_F | 1.924 | 1.00 | |
| 87_E | 202_N | 1.863 | 1.00 | |
| 125_P | 128_T | 1.826 | 1.00 | |
| 75_T | 117_E | 1.819 | 1.00 | |
| 236_N | 240_A | 1.817 | 1.00 | |
| 165_N | 168_E | 1.801 | 1.00 | |
| 216_G | 220_K | 1.775 | 1.00 | |
| 178_S | 233_I | 1.754 | 1.00 | |
| 192_R | 230_Y | 1.751 | 1.00 | |
| 218_F | 223_M | 1.744 | 1.00 | |
| 52_I | 58_L | 1.734 | 1.00 | |
| 115_A | 119_S | 1.712 | 1.00 | |
| 60_K | 63_D | 1.695 | 1.00 | |
| 54_K | 117_E | 1.675 | 1.00 | |
| 54_K | 118_T | 1.675 | 1.00 | |
| 51_P | 118_T | 1.665 | 1.00 | |
| 93_H | 97_D | 1.662 | 1.00 | |
| 198_G | 202_N | 1.644 | 1.00 | |
| 38_E | 136_M | 1.641 | 1.00 | |
| 56_Q | 115_A | 1.623 | 1.00 | |
| 167_E | 221_S | 1.595 | 1.00 | |
| 217_R | 221_S | 1.591 | 1.00 | |
| 71_I | 93_H | 1.586 | 1.00 | |
| 57_T | 60_K | 1.576 | 1.00 | |
| 26_S | 36_E | 1.553 | 1.00 | |
| 206_L | 211_I | 1.55 | 1.00 | |
| 173_F | 204_L | 1.511 | 1.00 | |
| 144_M | 147_M | 1.503 | 1.00 | |
| 76_I | 119_S | 1.497 | 1.00 | |
| 65_L | 109_H | 1.492 | 1.00 | |
| 52_I | 121_V | 1.474 | 1.00 | |
| 219_Q | 225_A | 1.468 | 1.00 | |
| 219_Q | 226_V | 1.461 | 1.00 | |
| 77_K | 89_I | 1.452 | 1.00 | |
| 41_Q | 135_K | 1.433 | 1.00 | |
| 50_K | 123_E | 1.403 | 0.99 | |
| 197_R | 208_V | 1.399 | 0.99 | |
| 171_A | 239_L | 1.386 | 0.99 | |
| 77_K | 87_E | 1.381 | 0.99 | |
| 173_F | 200_I | 1.373 | 0.99 | |
| 33_T | 142_Q | 1.356 | 0.99 | |
| 71_I | 76_I | 1.348 | 0.99 | |
| 36_E | 40_D | 1.346 | 0.99 | |
| 77_K | 114_Q | 1.34 | 0.99 | |
| 126_F | 130_D | 1.339 | 0.99 | |
| 209_E | 213_R | 1.338 | 0.99 | |
| 190_E | 230_Y | 1.335 | 0.99 | |
| 134_G | 141_Q | 1.327 | 0.99 | |
| 128_T | 131_D | 1.311 | 0.99 | |
| 34_L | 38_E | 1.309 | 0.99 | |
| 198_G | 208_V | 1.301 | 0.99 | |
| 57_T | 112_F | 1.296 | 0.99 | |
| 238_A | 241_Q | 1.26 | 0.99 | |
| 71_I | 119_S | 1.259 | 0.99 | |
| 134_G | 138_N | 1.256 | 0.99 | |
| 57_T | 114_Q | 1.255 | 0.99 | |
| 216_G | 219_Q | 1.253 | 0.99 | |
| 68_L | 129_L | 1.252 | 0.99 | |
| 45_I | 128_T | 1.25 | 0.99 | |
| 101_F | 150_E | 1.25 | 0.99 | |
| 77_K | 116_L | 1.247 | 0.99 | |
| 190_E | 232_T | 1.207 | 0.98 | |
| 237_D | 240_A | 1.203 | 0.98 | |
| 46_I | 124_I | 1.185 | 0.98 | |
| 212_S | 216_G | 1.182 | 0.98 | |
| 131_D | 134_G | 1.168 | 0.97 | |
| 170_L | 204_L | 1.154 | 0.97 | |
| 154_D | 158_I | 1.139 | 0.97 | |
| 160_L | 172_A | 1.137 | 0.97 | |
| 41_Q | 44_N | 1.135 | 0.97 | |
| 38_E | 138_N | 1.133 | 0.97 | |
| 58_L | 76_I | 1.125 | 0.97 | |
| 48_R | 120_M | 1.115 | 0.96 | |
| 82_T | 86_D | 1.097 | 0.96 | |
| 167_E | 214_L | 1.089 | 0.96 | |
| 178_S | 236_N | 1.083 | 0.96 | |
| 52_I | 56_Q | 1.076 | 0.95 | |
| 93_H | 99_V | 1.076 | 0.95 | |
| 130_D | 134_G | 1.062 | 0.95 | |
| 173_F | 203_Y | 1.06 | 0.95 | |
| 100_G | 109_H | 1.057 | 0.95 | |
| 78_S | 111_S | 1.05 | 0.94 | |
| 214_L | 218_F | 1.04 | 0.94 | |
| 88_Q | 157_M | 1.036 | 0.94 | |
| 204_L | 211_I | 1.036 | 0.94 | |
| 164_K | 172_A | 1.036 | 0.94 | |
| 215_L | 226_V | 1.026 | 0.94 | |
| 53_Q | 115_A | 1.022 | 0.93 | |
| 52_I | 76_I | 1.014 | 0.93 | |
| 88_Q | 162_S | 1.003 | 0.93 | |
| 41_Q | 136_M | 1.002 | 0.92 |
- Text file of predictions (all 3L/2 predictions)
- Generate restraints for ROSETTA Structure Modeling
Legend: Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on 10 HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.
| PDB | Chains | Cov | P(%) | HHΔ | Acc | |
| 2gauA | 1 | 0.924 | 100 | 0.311 | Contact Map | 0.814 |
| 3d0sA | 2 | 0.904 | 100 | 0.323 | Contact Map | 0.767 |
| 3dv8A | 1 | 0.868 | 100 | 0.338 | Contact Map | 0.76 |
| 3e97A | 1 | 0.916 | 100 | 0.34 | Contact Map | 0.676 |
| 4ev0A | 2 | 0.86 | 100 | 0.342 | Contact Map | 0.835 |
| 3fx3A | 2 | 0.92 | 100 | 0.346 | Contact Map | 0.755 |
| 3dkwA | 10 | 0.9 | 100 | 0.347 | Contact Map | 0.837 |
| 2fmyA | 4 | 0.876 | 100 | 0.351 | Contact Map | 0.808 |
| 3iwzA | 4 | 0.892 | 100 | 0.355 | Contact Map | 0.846 |
| 3e6cC | 1 | 0.932 | 100 | 0.355 | Contact Map | 0.699 |
Sequence Conservation (Image Generated using WebLogo v3)