| UniProt: | P0A7L0 | Sequence |
Download Alignment We filter this alignment to remove sites that have > 75% gaps before running GREMLIN. |
| EcoGene: | EG10864 | ||
| Length: | 234 (230) | ||
| Sequences: | 1708 | ||
| Seq/Len: | 7.43 |
| RL1
Paralog alert: 0.04 [within 20: 0.00] - ratio of genomes with paralogs |
Legend: The darker and larger the blue dots, the higher coevolution strength.
Residue pairs sorted by coevolution strength:
| i | j | Scaled Score | Prob | |
| 181_D | 184_K | 4.525 | 1.00 | |
| 175_I | 189_L | 3.915 | 1.00 | |
| 83_N | 86_A | 3.909 | 1.00 | |
| 14_K | 32_E | 3.852 | 1.00 | |
| 85_E | 89_A | 3.364 | 1.00 | |
| 10_V | 13_E | 3.316 | 1.00 | |
| 50_I | 165_N | 3.185 | 1.00 | |
| 67_H | 187_E | 3.104 | 1.00 | |
| 39_V | 179_D | 2.992 | 1.00 | |
| 148_N | 151_E | 2.959 | 1.00 | |
| 85_E | 88_K | 2.948 | 1.00 | |
| 67_H | 184_K | 2.902 | 1.00 | |
| 115_I | 156_A | 2.746 | 1.00 | |
| 28_A | 182_A | 2.72 | 1.00 | |
| 30_L | 216_T | 2.673 | 1.00 | |
| 28_A | 32_E | 2.444 | 1.00 | |
| 46_V | 196_L | 2.413 | 1.00 | |
| 103_Q | 108_E | 2.408 | 1.00 | |
| 102_D | 106_K | 2.367 | 1.00 | |
| 9_R | 13_E | 2.314 | 1.00 | |
| 195_A | 199_A | 2.314 | 1.00 | |
| 76_A | 94_L | 2.119 | 1.00 | |
| 5_T | 8_M | 2.088 | 1.00 | |
| 36_A | 40_E | 2.083 | 1.00 | |
| 34_A | 40_E | 2.079 | 1.00 | |
| 94_L | 108_E | 2.068 | 1.00 | |
| 24_N | 186_K | 2.061 | 1.00 | |
| 78_F | 114_V | 2.047 | 1.00 | |
| 41_S | 174_T | 1.979 | 1.00 | |
| 105_K | 126_Q | 1.969 | 1.00 | |
| 52_A | 165_N | 1.912 | 1.00 | |
| 150_A | 154_K | 1.853 | 1.00 | |
| 173_T | 192_L | 1.812 | 1.00 | |
| 8_M | 12_R | 1.79 | 1.00 | |
| 101_A | 123_V | 1.779 | 1.00 | |
| 79_T | 84_A | 1.752 | 1.00 | |
| 42_V | 178_V | 1.733 | 1.00 | |
| 44_V | 189_L | 1.717 | 1.00 | |
| 155_N | 160_Q | 1.699 | 1.00 | |
| 31_K | 181_D | 1.662 | 1.00 | |
| 98_E | 123_V | 1.654 | 1.00 | |
| 4_L | 8_M | 1.639 | 1.00 | |
| 16_D | 19_K | 1.623 | 1.00 | |
| 38_F | 218_M | 1.62 | 1.00 | |
| 82_A | 85_E | 1.609 | 1.00 | |
| 46_V | 212_V | 1.594 | 1.00 | |
| 23_I | 189_L | 1.59 | 1.00 | |
| 42_V | 216_T | 1.587 | 1.00 | |
| 213_S | 221_G | 1.579 | 1.00 | |
| 27_I | 214_I | 1.53 | 1.00 | |
| 76_A | 114_V | 1.512 | 0.99 | |
| 183_D | 187_E | 1.509 | 0.99 | |
| 7_R | 35_T | 1.496 | 0.99 | |
| 45_A | 215_S | 1.493 | 0.99 | |
| 27_I | 182_A | 1.46 | 0.99 | |
| 49_G | 204_A | 1.436 | 0.99 | |
| 15_V | 29_L | 1.416 | 0.99 | |
| 97_M | 120_A | 1.415 | 0.99 | |
| 30_L | 222_V | 1.4 | 0.99 | |
| 19_K | 25_E | 1.393 | 0.99 | |
| 74_R | 110_N | 1.379 | 0.99 | |
| 76_A | 108_E | 1.375 | 0.99 | |
| 200_K | 204_A | 1.375 | 0.99 | |
| 30_L | 178_V | 1.374 | 0.99 | |
| 7_R | 10_V | 1.372 | 0.99 | |
| 14_K | 33_L | 1.366 | 0.99 | |
| 98_E | 102_D | 1.346 | 0.98 | |
| 27_I | 186_K | 1.339 | 0.98 | |
| 72_S | 93_E | 1.329 | 0.98 | |
| 186_K | 190_E | 1.327 | 0.98 | |
| 46_V | 193_L | 1.316 | 0.98 | |
| 197_K | 209_I | 1.315 | 0.98 | |
| 176_G | 185_L | 1.305 | 0.98 | |
| 151_E | 155_N | 1.301 | 0.98 | |
| 88_K | 95_V | 1.267 | 0.97 | |
| 24_N | 28_A | 1.252 | 0.97 | |
| 103_Q | 106_K | 1.244 | 0.97 | |
| 94_L | 103_Q | 1.236 | 0.97 | |
| 163_Y | 199_A | 1.223 | 0.97 | |
| 27_I | 185_L | 1.223 | 0.97 | |
| 31_K | 182_A | 1.211 | 0.96 | |
| 26_A | 224_V | 1.209 | 0.96 | |
| 76_A | 100_L | 1.204 | 0.96 | |
| 80_Q | 97_M | 1.203 | 0.96 | |
| 102_D | 105_K | 1.181 | 0.96 | |
| 33_L | 219_G | 1.172 | 0.96 | |
| 30_L | 34_A | 1.171 | 0.95 | |
| 4_L | 9_R | 1.169 | 0.95 | |
| 96_G | 99_D | 1.161 | 0.95 | |
| 84_A | 95_V | 1.152 | 0.95 | |
| 10_V | 14_K | 1.149 | 0.95 | |
| 80_Q | 123_V | 1.142 | 0.95 | |
| 45_A | 172_H | 1.138 | 0.94 | |
| 216_T | 219_G | 1.118 | 0.94 | |
| 44_V | 192_L | 1.105 | 0.93 | |
| 104_I | 111_F | 1.1 | 0.93 | |
| 170_I | 211_K | 1.1 | 0.93 | |
| 30_L | 33_L | 1.094 | 0.93 | |
| 86_A | 150_A | 1.079 | 0.92 | |
| 22_D | 25_E | 1.055 | 0.91 | |
| 117_S | 147_P | 1.053 | 0.91 | |
| 182_A | 186_K | 1.039 | 0.90 | |
| 7_R | 11_I | 1.008 | 0.88 | |
| 212_V | 224_V | 1.007 | 0.88 | |
| 82_A | 147_P | 1.005 | 0.88 |
- Text file of predictions (all 3L/2 predictions)
- Generate restraints for ROSETTA Structure Modeling
Legend: Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on 10 HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.
| PDB | Chains | Cov | P(%) | HHΔ | Acc | |
| 2wwq5 | 1 | 1 | 100 | 0.123 | Contact Map | 0.59 |
| 3j3w5 | 1 | 0.9915 | 100 | 0.138 | Contact Map | 0.415 |
| 3bboD | 1 | 1 | 100 | 0.139 | Contact Map | 0.617 |
| 3qoyA | 1 | 1 | 100 | 0.147 | Contact Map | 0.795 |
| 3u42A | 1 | 0.9744 | 100 | 0.151 | Contact Map | 0.738 |
| 1i2aA | 1 | 0.8974 | 100 | 0.281 | Contact Map | 0.673 |
| 3j21A | 1 | 0.8846 | 100 | 0.283 | Contact Map | 0.402 |
| 3j3bz | 1 | 0.8803 | 100 | 0.293 | Contact Map | 0.487 |
| 2zkr5 | 1 | 0.8632 | 100 | 0.296 | Contact Map | 0.542 |
| 3zf7J | 1 | 0.8761 | 100 | 0.3 | Contact Map | 0.452 |
Sequence Conservation (Image Generated using WebLogo v3)