| UniProt: | P0A6F9 | Sequence |
Download Alignment We filter this alignment to remove sites that have > 75% gaps before running GREMLIN. |
| EcoGene: | EG10600 | ||
| Length: | 97 (96) | ||
| Sequences: | 1640 | ||
| Seq/Len: | 17.08 |
| CH10
Paralog alert: 0.08 [within 20: 0.01] - ratio of genomes with paralogs |
Legend: The darker and larger the blue dots, the higher coevolution strength.
Residue pairs sorted by coevolution strength:
| i | j | Scaled Score | Prob | |
| 13_K | 81_E | 4.552 | 1.00 | |
| 13_K | 39_E | 4.431 | 1.00 | |
| 10_V | 91_I | 3.373 | 1.00 | |
| 77_K | 82_E | 2.801 | 1.00 | |
| 49_L | 53_E | 2.725 | 1.00 | |
| 48_I | 54_V | 2.653 | 1.00 | |
| 59_V | 91_I | 2.442 | 1.00 | |
| 37_R | 64_I | 2.293 | 1.00 | |
| 14_R | 67_F | 1.941 | 1.00 | |
| 4_R | 96_E | 1.918 | 1.00 | |
| 3_I | 93_A | 1.895 | 1.00 | |
| 38_G | 67_F | 1.784 | 1.00 | |
| 41_L | 83_V | 1.759 | 1.00 | |
| 70_G | 73_V | 1.709 | 1.00 | |
| 42_A | 61_V | 1.577 | 1.00 | |
| 49_L | 55_K | 1.569 | 1.00 | |
| 60_K | 63_D | 1.549 | 1.00 | |
| 19_T | 32_A | 1.527 | 1.00 | |
| 58_D | 88_E | 1.477 | 1.00 | |
| 57_L | 88_E | 1.474 | 1.00 | |
| 39_E | 61_V | 1.451 | 1.00 | |
| 20_K | 26_V | 1.439 | 1.00 | |
| 15_K | 39_E | 1.381 | 0.99 | |
| 45_N | 58_D | 1.356 | 0.99 | |
| 13_K | 83_V | 1.345 | 0.99 | |
| 15_K | 64_I | 1.332 | 0.99 | |
| 39_E | 64_I | 1.32 | 0.99 | |
| 43_V | 57_L | 1.305 | 0.99 | |
| 39_E | 62_G | 1.264 | 0.99 | |
| 75_S | 82_E | 1.26 | 0.99 | |
| 71_Y | 87_S | 1.258 | 0.99 | |
| 36_T | 74_K | 1.228 | 0.98 | |
| 65_V | 91_I | 1.185 | 0.98 | |
| 11_I | 85_I | 1.168 | 0.97 | |
| 12_V | 86_M | 1.164 | 0.97 | |
| 47_R | 89_S | 1.126 | 0.97 | |
| 8_D | 87_S | 1.11 | 0.96 | |
| 29_G | 32_A | 1.092 | 0.96 | |
| 3_I | 11_I | 1.079 | 0.95 | |
| 4_R | 94_I | 1.073 | 0.95 | |
| 67_F | 84_L | 1.035 | 0.94 | |
| 32_A | 75_S | 1.029 | 0.94 | |
| 38_G | 86_M | 1.029 | 0.94 | |
| 12_V | 38_G | 1.024 | 0.93 | |
| 68_N | 92_L | 1.009 | 0.93 | |
| 36_T | 69_D | 1.002 | 0.92 | |
| 54_V | 58_D | 1 | 0.92 |
- Text file of predictions (all 3L/2 predictions)
- Generate restraints for ROSETTA Structure Modeling
Legend: Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on 10 HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.
| PDB | Chains | Cov | P(%) | HHΔ | Acc | |
| 3nx6A | 1 | 0.9794 | 100 | 0.032 | Contact Map | 0.638 |
| 1we3O | 7 | 0.9794 | 100 | 0.035 | Contact Map | 0.809 |
| 1pcqO | 7 | 1 | 100 | 0.045 | Contact Map | 0.657 |
| 1p3hA | 14 | 0.9897 | 100 | 0.047 | Contact Map | 0.883 |
| 1g31A | 7 | 0.866 | 99.9 | 0.238 | Contact Map | 0.538 |
| 1yb5A | 2 | 0.8454 | 35.4 | 0.902 | Contact Map | 0.488 |
| 4dupA | 2 | 0.8247 | 30 | 0.906 | Contact Map | 0.635 |
| 2j8zA | 1 | 0.8351 | 29.1 | 0.906 | Contact Map | 0.502 |
| 4ilkA | 2 | 0.8969 | 28.4 | 0.907 | Contact Map | 0.524 |
| 4dvjA | 2 | 0.8454 | 27.7 | 0.907 | Contact Map | 0.685 |
Sequence Conservation (Image Generated using WebLogo v3)