May 4, 2021 - We are working on upgrading the webserver, some pages may not work.
OPENSEQ.org

RUVB - YEBC
UniProt:
Length: 582
Sequences: 1459
Seq/Len: 2.53
I_Prob: 0.00
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
149_K 110_V 0.86 0.00
228_R 29_I 0.83 0.00
118_L 117_F 0.82 0.00
310_F 177_E 0.81 0.00
328_F 225_D 0.80 0.00
218_G 114_R 0.80 0.00
30_E 97_I 0.80 0.00
196_S 160_E 0.80 0.00
158_I 27_K 0.76 0.00
112_I 224_E 0.76 0.00
206_D 24_I 0.73 0.00
130_M 170_I 0.72 0.00
158_I 126_T 0.71 0.00
28_L 102_L 0.70 0.00
90_V 110_V 0.70 0.00
241_T 103_S 0.70 0.00
268_L 148_D 0.70 0.00
291_G 132_Y 0.69 0.00
180_R 2_A 0.69 0.00
228_R 142_F 0.69 0.00
256_V 149_T 0.69 0.00
212_V 150_I 0.68 0.00
122_V 129_S 0.67 0.00
37_V 72_R 0.67 0.00
50_L 178_E 0.67 0.00
238_H 91_G 0.67 0.00
228_R 110_V 0.67 0.00
208_G 132_Y 0.67 0.00
241_T 220_I 0.66 0.00
26_K 115_H 0.66 0.00
328_F 208_M 0.66 0.00
102_T 198_V 0.66 0.00
135_L 51_A 0.65 0.00
120_P 63_R 0.65 0.00
19_A 129_S 0.65 0.00
201_G 190_G 0.65 0.00
128_P 50_R 0.65 0.00
248_A 142_F 0.65 0.00
203_E 207_D 0.64 0.00
286_L 139_V 0.64 0.00
284_D 117_F 0.64 0.00
37_V 151_M 0.64 0.00
212_V 35_A 0.64 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

Page generated in 0.0575 seconds.